Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G275500.1 | Wheat | cytosol | 87.68 | 87.68 |
| TraesCS5B01G267500.1 | Wheat | cytosol | 87.68 | 87.68 |
| HORVU3Hr1G030970.1 | Barley | cytosol | 87.68 | 87.68 |
| TraesCS5D01G275400.1 | Wheat | cytosol | 83.33 | 83.33 |
| HORVU5Hr1G073650.1 | Barley | cytosol | 81.88 | 81.88 |
| HORVU5Hr1G073690.1 | Barley | cytosol | 81.88 | 81.88 |
| TraesCS5D01G275700.1 | Wheat | cytosol | 76.81 | 75.18 |
| HORVU5Hr1G073700.1 | Barley | cytosol, mitochondrion, nucleus | 86.96 | 75.0 |
| TraesCS5B01G267400.1 | Wheat | cytosol | 89.13 | 73.65 |
| HORVU5Hr1G073640.1 | Barley | cytosol, mitochondrion, nucleus | 86.96 | 73.62 |
| Os11t0594800-01 | Rice | cytosol | 66.67 | 64.79 |
| Os11t0594700-00 | Rice | nucleus | 65.94 | 64.08 |
| HORVU5Hr1G073710.1 | Barley | mitochondrion | 86.96 | 60.3 |
| TraesCS4D01G343700.1 | Wheat | cytosol | 61.59 | 59.03 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 60.14 | 58.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.93 | 54.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.2 | 53.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.48 | 52.63 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 48.55 | 44.97 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 48.55 | 42.14 |
| Os11t0595000-00 | Rice | nucleus | 59.42 | 40.8 |
| TraesCS3D01G236400.1 | Wheat | cytosol | 39.86 | 40.44 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 43.48 | 38.22 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 44.2 | 36.31 |
| TraesCS1D01G184600.1 | Wheat | plastid | 43.48 | 35.71 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 40.58 | 25.45 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G275600.1 | EnsemblPlantsGene:TraesCS5D01G275600 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF26 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 | MapMan:35.2 |
Description
No Description!
Coordinates
chr5D:+:378142538..378142954
Molecular Weight (calculated)
15276.1 Da
IEP (calculated)
5.064
GRAVY (calculated)
-0.359
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQLVESHR AGAEVHKGND ICKKKTVELL EELGLPKGLF PMDDIEEVGH NCETGFVWIV QKKKKEHTFR KINQTVSYDT EVTAFVEKGK IKEVTGVKIE
101: ALSLVEVSVD ESSADKVTVK TDTGLSDTHD ASAFALWE
101: ALSLVEVSVD ESSADKVTVK TDTGLSDTHD ASAFALWE
001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
Arabidopsis Description
SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.