Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G199500.1 | Wheat | cytosol | 95.24 | 94.67 |
| TraesCS1A01G181100.1 | Wheat | mitochondrion | 92.26 | 94.51 |
| HORVU1Hr1G047930.1 | Barley | plastid | 92.26 | 94.51 |
| Zm00001d032443_P001 | Maize | extracellular | 79.76 | 72.83 |
| EER91364 | Sorghum | cytosol | 79.76 | 69.79 |
| Solyc08g083090.1.1 | Tomato | cytosol | 54.17 | 59.09 |
| PGSC0003DMT400031909 | Potato | cytosol | 54.17 | 58.71 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 54.76 | 58.23 |
| AT4G24130.1 | Thale cress | cytosol | 54.17 | 57.96 |
| CDY10988 | Canola | cytosol | 51.79 | 55.41 |
| Bra019245.1-P | Field mustard | cytosol | 51.79 | 55.41 |
| CDX92616 | Canola | cytosol | 51.79 | 55.41 |
| VIT_02s0025g02540.t01 | Wine grape | cytosol | 50.0 | 54.19 |
| KRH02460 | Soybean | cytosol | 50.0 | 53.5 |
| KRH50651 | Soybean | cytosol | 50.0 | 53.5 |
| Bra013765.1-P | Field mustard | cytosol | 49.4 | 52.87 |
| CDY34258 | Canola | cytosol | 49.4 | 52.87 |
| KRH12720 | Soybean | cytosol | 49.4 | 51.88 |
| CDY03486 | Canola | cytosol | 48.21 | 51.59 |
| TraesCS5D01G275400.1 | Wheat | cytosol | 36.9 | 44.93 |
| PGSC0003DMT400015025 | Potato | cytosol | 27.38 | 44.66 |
| TraesCS5D01G275600.1 | Wheat | cytosol | 35.71 | 43.48 |
| PGSC0003DMT400015026 | Potato | cytosol | 39.88 | 43.23 |
| TraesCS5D01G275700.1 | Wheat | cytosol | 35.71 | 42.55 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 36.31 | 40.94 |
| TraesCS5D01G275500.1 | Wheat | cytosol | 33.33 | 40.58 |
| TraesCS3D01G236400.1 | Wheat | cytosol | 32.14 | 39.71 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 36.9 | 39.49 |
| TraesCS4D01G343700.1 | Wheat | cytosol | 33.33 | 38.89 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 36.31 | 38.36 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 34.52 | 34.52 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 33.93 | 25.91 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G184600.1 | EnsemblPlantsGene:TraesCS1D01G184600 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF20 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 | MapMan:35.2 |
Description
No Description!
Coordinates
chr1D:-:255426922..255427428
Molecular Weight (calculated)
18292.8 Da
IEP (calculated)
6.790
GRAVY (calculated)
-0.421
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLTVSQTT PAAGSANKQR EGAEIITGAE ACYEHSKELL KGLGFPGGVM PLRGLEECGL VRETGYVWMR QGKPYEHHFR ATGTRVRYDA EVTAYVEEGR
101: MKRMTGVRSK QMMLWVPIVE MSLDGADKVY FKSNVGIGRS FPATAFADED APADNARAPA AAEASDKQ
101: MKRMTGVRSK QMMLWVPIVE MSLDGADKVY FKSNVGIGRS FPATAFADED APADNARAPA AAEASDKQ
001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
Arabidopsis Description
T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.