CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02460	Soybean	cytosol	94.27	94.27
VIT_02s0025g02540.t01	Wine grape	cytosol	75.16	76.13
KRH12720	Soybean	cytosol	73.25	71.88
PGSC0003DMT400031909	Potato	cytosol	70.06	70.97
Solyc08g083090.1.1	Tomato	cytosol	68.79	70.13
GSMUA_Achr4P30400_001	Banana	cytosol	57.32	56.96
PGSC0003DMT400015025	Potato	cytosol	36.94	56.31
PGSC0003DMT400015026	Potato	cytosol	52.87	53.55
HORVU1Hr1G047930.1	Barley	plastid	53.5	51.22
TraesCS1A01G181100.1	Wheat	mitochondrion	53.5	51.22
TraesCS1D01G184600.1	Wheat	plastid	53.5	50.0
TraesCS1B01G199500.1	Wheat	cytosol	53.5	49.7
Zm00001d032443_P001	Maize	extracellular	54.78	46.74
EER91364	Sorghum	cytosol	56.05	45.83
KRH27038	Soybean	cytosol	36.94	42.65
KRH22290	Soybean	cytosol	35.67	41.18
KRH11189	Soybean	cytosol	41.4	40.12
KRH33794	Soybean	cytosol	40.76	35.96
KRH68428	Soybean	cytosol	37.58	35.76
KRH50684	Soybean	cytosol	34.39	32.93
KRH02405	Soybean	cytosol	33.76	32.32

Protein Annotations

EMBL:ACUP02004709	EMBL:BT092771	EnsemblPlants:KRH50651	EnsemblPlantsGene:GLYMA_07G234400	EntrezGene:100527887	Gene3D:2.30.240.10
InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF66	PFAM:PF04398
ProteinID:KRH50651	ProteinID:KRH50651.1	SUPFAM:SSF141562	UniParc:UPI0001B15EDC	UniProt:C6T5Q8	MapMan:35.2

Description

hypothetical protein

Coordinates

chr7:+:41546369..41547321

Molecular Weight (calculated)

18043.1 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.431

Length

157 amino acids

Sequence
(BLAST)

001: MASVGKERAG AEIVYGSEEC YRQSIELLEE LGFPKGVLPL QDLVECGRVR ETGFVWMKQK APYEHFFEGT NTRVSYAVEV TGYVEKFRMK KMTGIKSKQM
101: MLWVPIAEMS IEDPKGQKIH FKTPMGIGKS FPIMAFMTPE EKEKHLLLQD KEIQENN

Best Arabidopsis Sequence Match ( AT4G24130.1 )
(BLAST)

001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN

Arabidopsis Description

T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.