CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33794	Soybean	cytosol	69.7	64.61
CDY57268	Canola	cytosol	52.12	59.72
CDX93512	Canola	cytosol	50.91	59.57
CDY04373	Canola	cytosol	51.52	59.03
Bra038924.1-P	Field mustard	cytosol	50.3	57.64
CDY41704	Canola	cytosol	53.94	57.42
CDX95276	Canola	cytosol	53.94	57.42
Bra027928.1-P	Field mustard	cytosol	53.33	56.77
AT1G56580.1	Thale cress	cytosol	55.76	55.42
CDY48399	Canola	cytosol	55.76	55.42
CDY31099	Canola	cytosol	56.36	55.03
Bra038157.1-P	Field mustard	cytosol	55.15	54.82
CDY32168	Canola	cytosol	55.15	54.17
Bra030768.1-P	Field mustard	cytosol	54.55	53.25
AT1G09310.1	Thale cress	cytosol	55.76	51.4
Bra018568.1-P	Field mustard	cytosol	55.76	50.0
KRH22290	Soybean	cytosol	38.79	47.06
KRH27038	Soybean	cytosol	38.79	47.06
KRH11189	Soybean	cytosol	45.45	46.3
KRH02405	Soybean	cytosol	41.82	42.07
KRH50684	Soybean	cytosol	41.82	42.07
KRH02460	Soybean	cytosol	35.76	37.58
KRH50651	Soybean	cytosol	35.76	37.58
KRH12720	Soybean	cytosol	35.15	36.25

Protein Annotations

EMBL:ACUP02002115	EnsemblPlants:KRH68428	EnsemblPlantsGene:GLYMA_03G230600	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF10	PFAM:PF04398	ProteinID:KRH68428	ProteinID:KRH68428.1
SUPFAM:SSF141562	UniParc:UPI00023C17C4	UniProt:I1JR44	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr3:-:43215088..43216169

Molecular Weight (calculated)

18645.5 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.428

Length

165 amino acids

Sequence
(BLAST)

001: MSSLIAEDVK SRSEVYHGDE MCQVKSKELL KEIALPNGLL PLKDMEECGY DRQTAFVWLK QKKSYTHKFD KIGKLVSYAP EVTAHVQQGK ITKLTGVKTK
101: ELLLWITLSD IYVDDPPTGK ITFKTPAGLF RSFPVSAFEI QEEPEAKDTT KRVPDTAEPV QVKEL

Best Arabidopsis Sequence Match ( AT1G09310.1 )
(BLAST)

001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.