Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93512 | Canola | cytosol | 70.95 | 90.07 |
| CDY31099 | Canola | cytosol | 84.36 | 89.35 |
| CDY32168 | Canola | cytosol | 83.24 | 88.69 |
| Bra030768.1-P | Field mustard | cytosol | 82.12 | 86.98 |
| Bra018568.1-P | Field mustard | cytosol | 86.03 | 83.7 |
| AT1G56580.1 | Thale cress | cytosol | 71.51 | 77.11 |
| KRH68428 | Soybean | cytosol | 51.4 | 55.76 |
| AT5G46230.1 | Thale cress | cytosol | 36.87 | 46.15 |
| AT4G24130.1 | Thale cress | cytosol | 34.08 | 38.85 |
| AT5G49600.1 | Thale cress | cytosol | 35.2 | 36.84 |
| AT1G30020.1 | Thale cress | cytosol | 29.05 | 33.12 |
Protein Annotations
| Gene3D:2.30.240.10 | MapMan:35.2 | EntrezGene:837452 | UniProt:A0A178W8C5 | ProteinID:AAD18096.1 | ProteinID:AEE28428.1 |
| EMBL:AF348589 | ArrayExpress:AT1G09310 | EnsemblPlantsGene:AT1G09310 | RefSeq:AT1G09310 | TAIR:AT1G09310 | RefSeq:AT1G09310-TAIR-G |
| EnsemblPlants:AT1G09310.1 | TAIR:AT1G09310.1 | EMBL:AY045914 | EMBL:AY079406 | EMBL:AY084527 | InterPro:At5g01610-like |
| InterPro:DUF538 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0048046 | InterPro:IPR036758 |
| RefSeq:NP_563841.1 | ProteinID:OAP14687.1 | PFAM:PF04398 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF10 |
| UniProt:Q9ZPZ4 | SUPFAM:SSF141562 | UniParc:UPI000005EB66 | SEG:seg | : | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
Coordinates
chr1:+:3008910..3009898
Molecular Weight (calculated)
19948.1 Da
IEP (calculated)
5.064
GRAVY (calculated)
-0.366
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.