Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017568.1-P | Field mustard | cytosol | 83.92 | 83.33 |
| CDY35153 | Canola | cytosol | 83.92 | 83.33 |
| Bra022026.1-P | Field mustard | cytosol | 80.42 | 81.56 |
| CDY43960 | Canola | cytosol | 80.42 | 81.56 |
| CDX87732 | Canola | cytosol | 77.62 | 77.62 |
| Bra025029.1-P | Field mustard | cytosol | 74.13 | 73.61 |
| CDY33463 | Canola | cytosol | 74.13 | 73.61 |
| CDY62357 | Canola | cytosol | 73.43 | 72.92 |
| CDY03234 | Canola | plastid | 84.62 | 68.75 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 58.04 | 59.29 |
| PGSC0003DMT400024987 | Potato | cytosol | 55.24 | 56.43 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 56.64 | 54.36 |
| Solyc02g070500.1.1 | Tomato | cytosol | 54.55 | 53.06 |
| PGSC0003DMT400054524 | Potato | cytosol | 53.15 | 52.05 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 49.65 | 47.33 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 49.65 | 47.33 |
| TraesCSU01G231600.1 | Wheat | cytosol | 41.26 | 46.83 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 48.25 | 46.31 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 48.25 | 46.31 |
| EER89876 | Sorghum | cytosol | 49.65 | 46.1 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 48.25 | 46.0 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 47.55 | 45.64 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 46.15 | 45.52 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 48.25 | 45.39 |
| TraesCSU01G243200.1 | Wheat | cytosol | 47.55 | 45.33 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 48.25 | 44.81 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 46.85 | 44.67 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 49.65 | 44.65 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 49.65 | 44.65 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 48.95 | 44.03 |
| KRH11189 | Soybean | cytosol | 49.65 | 43.83 |
| Zm00001d008910_P001 | Maize | cytosol | 38.46 | 43.65 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 47.55 | 43.31 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 35.66 | 43.22 |
| GSMUA_Achr10P... | Banana | cytosol | 46.85 | 42.95 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 48.25 | 42.86 |
| GSMUA_Achr10P... | Banana | cytosol | 44.76 | 42.11 |
| EES00076 | Sorghum | cytosol | 50.35 | 42.11 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 46.15 | 42.04 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 45.45 | 41.4 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 45.45 | 41.4 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 48.25 | 41.32 |
| AT1G56580.1 | Thale cress | cytosol | 43.36 | 37.35 |
| AT1G09310.1 | Thale cress | cytosol | 46.15 | 36.87 |
| AT4G24130.1 | Thale cress | cytosol | 39.86 | 36.31 |
| AT1G30020.1 | Thale cress | cytosol | 39.86 | 36.31 |
| Os06t0538900-01 | Rice | plastid | 44.06 | 33.16 |
| HORVU3Hr1G028780.1 | Barley | plastid | 51.05 | 29.55 |
| AT5G49600.1 | Thale cress | cytosol | 34.97 | 29.24 |
Protein Annotations
| Gene3D:2.30.240.10 | MapMan:35.2 | EntrezGene:834665 | ProteinID:AED95355.1 | ArrayExpress:AT5G46230 | EnsemblPlantsGene:AT5G46230 |
| RefSeq:AT5G46230 | TAIR:AT5G46230 | RefSeq:AT5G46230-TAIR-G | EnsemblPlants:AT5G46230.1 | TAIR:AT5G46230.1 | EMBL:AY085507 |
| InterPro:At5g01610-like | ProteinID:BAB11078.1 | EMBL:BT026341 | InterPro:DUF538 | GO:GO:0008150 | InterPro:IPR036758 |
| RefSeq:NP_568659.1 | PFAM:PF04398 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31676 |
| PANTHER:PTHR31676:SF7 | UniProt:Q9FL37 | SUPFAM:SSF141562 | UniParc:UPI00000A25D7 | : | : |
Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
Coordinates
chr5:-:18742272..18743077
Molecular Weight (calculated)
16173.3 Da
IEP (calculated)
7.511
GRAVY (calculated)
-0.559
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.