Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43960 | Canola | cytosol | 90.21 | 91.49 |
| CDY33463 | Canola | cytosol | 82.52 | 81.94 |
| CDY62357 | Canola | cytosol | 81.82 | 81.25 |
| CDY35153 | Canola | cytosol | 79.02 | 78.47 |
| AT5G46230.1 | Thale cress | cytosol | 77.62 | 77.62 |
| CDY03234 | Canola | plastid | 79.02 | 64.2 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 58.74 | 60.0 |
| PGSC0003DMT400024987 | Potato | cytosol | 56.64 | 57.86 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 58.74 | 56.38 |
| CDX90222 | Canola | cytosol | 37.76 | 55.1 |
| Solyc02g070500.1.1 | Tomato | cytosol | 55.94 | 54.42 |
| PGSC0003DMT400054524 | Potato | cytosol | 54.55 | 53.42 |
| TraesCSU01G231600.1 | Wheat | cytosol | 44.06 | 50.0 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 51.75 | 49.33 |
| CDY35265 | Canola | cytosol | 48.25 | 49.29 |
| EER89876 | Sorghum | cytosol | 52.45 | 48.7 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 51.75 | 48.68 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 51.05 | 48.67 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 50.35 | 48.32 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 50.35 | 48.0 |
| TraesCSU01G243200.1 | Wheat | cytosol | 50.35 | 48.0 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 52.45 | 47.77 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 49.65 | 47.65 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 51.05 | 47.4 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 49.65 | 47.33 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 48.95 | 46.98 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 47.55 | 46.9 |
| GSMUA_Achr10P... | Banana | cytosol | 51.05 | 46.79 |
| GSMUA_Achr10P... | Banana | cytosol | 49.65 | 46.71 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 51.05 | 45.91 |
| CDY57268 | Canola | cytosol | 45.45 | 45.14 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 50.35 | 44.72 |
| CDX93512 | Canola | cytosol | 44.06 | 44.68 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 49.65 | 44.65 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 48.95 | 44.59 |
| KRH11189 | Soybean | cytosol | 50.35 | 44.44 |
| CDY04373 | Canola | cytosol | 44.76 | 44.44 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 36.36 | 44.07 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 48.95 | 44.03 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 48.25 | 43.95 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 48.25 | 43.95 |
| EES00076 | Sorghum | cytosol | 51.75 | 43.27 |
| Zm00001d008910_P001 | Maize | cytosol | 37.76 | 42.86 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 48.25 | 41.32 |
| CDY41704 | Canola | cytosol | 44.76 | 41.29 |
| CDX95276 | Canola | cytosol | 44.76 | 41.29 |
| CDY48399 | Canola | cytosol | 45.45 | 39.16 |
| CDY10988 | Canola | cytosol | 41.26 | 37.58 |
| CDX92616 | Canola | cytosol | 41.26 | 37.58 |
| CDY31099 | Canola | cytosol | 44.06 | 37.28 |
| CDY32168 | Canola | cytosol | 43.36 | 36.9 |
| CDY34258 | Canola | cytosol | 39.86 | 36.31 |
| CDY03486 | Canola | cytosol | 39.16 | 35.67 |
| Os06t0538900-01 | Rice | plastid | 45.45 | 34.21 |
| CDY05614 | Canola | cytosol | 34.97 | 29.94 |
| CDY33893 | Canola | cytosol | 34.27 | 29.17 |
| HORVU3Hr1G028780.1 | Barley | plastid | 50.35 | 29.15 |
| CDX85421 | Canola | cytosol | 34.27 | 28.82 |
| CDX86223 | Canola | cytosol | 34.27 | 28.66 |
Protein Annotations
| EnsemblPlants:CDX87732 | EnsemblPlantsGene:GSBRNA2T00146780001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | PFAM:PF04398 | ProteinID:CDX87732 | ProteinID:CDX87732.1 | SUPFAM:SSF141562 |
| UniParc:UPI0004EC7989 | MapMan:35.2 | : | : | : | : |
Description
BnaC02g32170D
Coordinates
chrLK031851:+:695938..696369
Molecular Weight (calculated)
16133.5 Da
IEP (calculated)
9.722
GRAVY (calculated)
-0.400
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSQETNQDQ RKGAEIVNGV LICKQKAHEI LSTMNLPKGL LPLDTMTEIG FNKSTGYIWI KMKNKVQHKF KAIGKNVSYD SEVTAFVEKR RMRSLTGIKS
101: KELLIWVTIS EIYVDDQDTT KITFAGPSGL SRSFPVSAFE DEK
101: KELLIWVTIS EIYVDDQDTT KITFAGPSGL SRSFPVSAFE DEK
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Arabidopsis Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.