Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010024.1-P | Field mustard | cytosol | 98.82 | 98.25 |
| CDX86223 | Canola | cytosol | 98.82 | 98.25 |
| CDY05614 | Canola | cytosol | 81.76 | 83.23 |
| CDY33893 | Canola | cytosol | 81.76 | 82.74 |
| AT5G49600.1 | Thale cress | cytosol | 80.59 | 80.12 |
| KRH50684 | Soybean | cytosol | 47.65 | 49.39 |
| KRH02405 | Soybean | cytosol | 45.88 | 47.56 |
| Solyc01g100750.2.1 | Tomato | cytosol | 42.94 | 44.79 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 43.53 | 44.58 |
| Solyc01g100760.2.1 | Tomato | cytosol | 41.76 | 43.29 |
| PGSC0003DMT400007217 | Potato | cytosol | 42.35 | 43.11 |
| Solyc01g100770.2.1 | Tomato | cytosol | 40.59 | 42.07 |
| CDX93512 | Canola | cytosol | 34.71 | 41.84 |
| CDY57268 | Canola | cytosol | 35.29 | 41.67 |
| CDY04373 | Canola | cytosol | 34.71 | 40.97 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 38.82 | 40.49 |
| PGSC0003DMT400007216 | Potato | cytosol | 40.59 | 39.43 |
| CDX95276 | Canola | cytosol | 35.29 | 38.71 |
| CDY41704 | Canola | cytosol | 34.71 | 38.06 |
| CDY48399 | Canola | cytosol | 35.29 | 36.14 |
| Zm00001d030642_P001 | Maize | mitochondrion | 25.29 | 36.13 |
| CDY31099 | Canola | cytosol | 35.88 | 36.09 |
| CDY32168 | Canola | cytosol | 34.71 | 35.12 |
| CDX87732 | Canola | cytosol | 28.82 | 34.27 |
| CDY43960 | Canola | cytosol | 28.24 | 34.04 |
| CDY35153 | Canola | cytosol | 28.24 | 33.33 |
| CDX90222 | Canola | cytosol | 18.82 | 32.65 |
| TraesCS5A01G086600.1 | Wheat | cytosol | 34.12 | 32.58 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 31.76 | 32.14 |
| TraesCSU01G068000.1 | Wheat | cytosol | 31.76 | 32.14 |
| Os11t0683600-00 | Rice | cytosol | 31.76 | 32.14 |
| CDY62357 | Canola | cytosol | 27.06 | 31.94 |
| CDY33463 | Canola | cytosol | 27.06 | 31.94 |
| CDX92616 | Canola | cytosol | 29.41 | 31.85 |
| CDY10988 | Canola | cytosol | 29.41 | 31.85 |
| CDY03486 | Canola | cytosol | 28.24 | 30.57 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 36.47 | 30.54 |
| EES08981 | Sorghum | cytosol | 30.0 | 30.36 |
| Zm00001d052772_P001 | Maize | cytosol | 30.0 | 30.0 |
| CDY34258 | Canola | cytosol | 27.65 | 29.94 |
| CDY35265 | Canola | cytosol | 24.12 | 29.29 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 35.29 | 28.04 |
| Zm00001d041578_P001 | Maize | cytosol, mitochondrion | 36.47 | 27.68 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 35.29 | 27.27 |
| CDY03234 | Canola | plastid | 27.65 | 26.7 |
| Zm00001d048649_P001 | Maize | cytosol | 27.65 | 25.13 |
| EES16171 | Sorghum | cytosol | 35.88 | 24.9 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 31.18 | 24.31 |
| HORVU5Hr1G022550.1 | Barley | plastid | 34.71 | 22.18 |
Protein Annotations
| EnsemblPlants:CDX85421 | EnsemblPlantsGene:GSBRNA2T00143108001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF34 | PFAM:PF04398 | ProteinID:CDX85421 | ProteinID:CDX85421.1 | SEG:seg |
| SUPFAM:SSF141562 | UniParc:UPI0004EBDBCD | MapMan:35.2 | : | : | : |
Description
BnaC07g27320D
Coordinates
chrLK031841:+:1738619..1739131
Molecular Weight (calculated)
19626.8 Da
IEP (calculated)
9.362
GRAVY (calculated)
-0.491
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAEAMRIKA EVYHGDKTCR EIFGSLLSQI GLPNRLLSNQ EIEECGYVKD TGFVWLKHKK KNKDDKKRHQ DSFRFGNVMV CFEDEVTAYF QPNTIKKLTG
101: VKAKEFVVWI SLGEIHVNRP SGLITFKTQV GLLSKSLPLS VFEDVQGKHD VMEKPKQDQQ KFNDPKIYLY
101: VKAKEFVVWI SLGEIHVNRP SGLITFKTQV GLLSKSLPLS VFEDVQGKHD VMEKPKQDQQ KFNDPKIYLY
001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
Arabidopsis Description
Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.