Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 66.26 | 65.06 |
| KRH33794 | Soybean | cytosol | 66.26 | 60.67 |
| Solyc01g100760.2.1 | Tomato | cytosol | 58.9 | 58.54 |
| Solyc01g100750.2.1 | Tomato | cytosol | 57.06 | 57.06 |
| PGSC0003DMT400007217 | Potato | cytosol | 57.67 | 56.29 |
| Solyc01g100770.2.1 | Tomato | cytosol | 55.83 | 55.49 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 47.85 | 54.55 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.42 | 53.51 |
| PGSC0003DMT400007216 | Potato | cytosol | 57.06 | 53.14 |
| GSMUA_Achr7P26230_001 | Banana | cytosol | 46.01 | 52.82 |
| GSMUA_Achr7P26210_001 | Banana | cytosol | 46.01 | 52.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.81 | 52.63 |
| GSMUA_Achr7P26220_001 | Banana | cytosol | 45.4 | 52.11 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.2 | 51.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.81 | 51.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.01 | 51.72 |
| GSMUA_Achr4P14140_001 | Banana | cytosol | 34.97 | 51.35 |
| Os11t0683600-00 | Rice | cytosol | 50.92 | 49.4 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 50.31 | 48.81 |
| Zm00001d030642_P001 | Maize | mitochondrion | 35.58 | 48.74 |
| TraesCSU01G068000.1 | Wheat | cytosol | 49.69 | 48.21 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 39.88 | 47.45 |
| GSMUA_Achr10P... | Banana | cytosol | 43.56 | 46.71 |
| TraesCS5A01G086600.1 | Wheat | cytosol | 50.92 | 46.63 |
| Zm00001d052772_P001 | Maize | cytosol | 48.47 | 46.47 |
| EES08981 | Sorghum | cytosol | 47.24 | 45.83 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 57.06 | 45.81 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 42.94 | 44.59 |
| Zm00001d048649_P001 | Maize | cytosol | 49.08 | 42.78 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 40.49 | 41.77 |
| CDY05614 | Canola | cytosol | 42.33 | 41.32 |
| AT5G49600.1 | Thale cress | cytosol | 42.94 | 40.94 |
| CDY33893 | Canola | cytosol | 41.72 | 40.48 |
| Bra020626.1-P | Field mustard | cytosol | 42.33 | 40.35 |
| GSMUA_Achr10P... | Banana | cytosol | 38.04 | 39.74 |
| Zm00001d041578_P001 | Maize | cytosol, mitochondrion | 53.99 | 39.29 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 51.53 | 39.25 |
| CDX86223 | Canola | cytosol | 41.1 | 39.18 |
| Bra010024.1-P | Field mustard | cytosol | 41.1 | 39.18 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 52.76 | 39.09 |
| CDX85421 | Canola | cytosol | 40.49 | 38.82 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 49.69 | 37.16 |
| EES16171 | Sorghum | cytosol | 55.21 | 36.73 |
| HORVU5Hr1G022550.1 | Barley | plastid | 52.76 | 32.33 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P12720_001 | EnsemblPlants:GSMUA_Achr3T12720_001 | EnsemblPlantsGene:GSMUA_Achr3G12720_001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF10 | PFAM:PF04398 | SUPFAM:SSF141562 | UniParc:UPI000295B131 |
| UniProt:M0SE39 | MapMan:35.2 | : | : | : | : |
Description
DUF538 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G12720_001]
Coordinates
chr3:+:9427199..9427995
Molecular Weight (calculated)
18015.8 Da
IEP (calculated)
8.046
GRAVY (calculated)
-0.301
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MALITDDVKA KAEIYHGDEI CQEKSKFLLQ EVGLPRGLLP LRDIVECGYV EETGFVWLKQ KQKVEHCFEK IGKRVSYSPE ITAVVEKSKI KKLTGVKAKE
101: LLVWITLDEI SADGPPAGKL TFKTPAGLFR TFPASAFDIE GEGRKQAKVA PPPDQSSQAV SQN
101: LLVWITLDEI SADGPPAGKL TFKTPAGLFR TFPASAFDIE GEGRKQAKVA PPPDQSSQAV SQN
001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.