CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G086600.1	Wheat	cytosol	55.51	76.4
Os12t0563600-03	Rice	cytosol, plasma membrane	63.27	76.35
Zm00001d030642_P001	Maize	mitochondrion	36.33	74.79
Zm00001d041578_P001	Maize	cytosol, mitochondrion	66.53	72.77
TraesCS5B01G092500.1	Wheat	cytosol	61.63	70.56
TraesCS5D01G100100.1	Wheat	cytosol	61.63	68.64
HORVU5Hr1G022550.1	Barley	plastid	61.22	56.39
GSMUA_Achr3P12720_001	Banana	cytosol	36.73	55.21
PGSC0003DMT400007217	Potato	cytosol	36.73	53.89
EES08981	Sorghum	cytosol	35.92	52.38
Solyc01g100750.2.1	Tomato	cytosol	34.69	52.15
Solyc01g100760.2.1	Tomato	cytosol	34.29	51.22
Solyc01g100770.2.1	Tomato	cytosol	34.29	51.22
VIT_14s0060g00900.t01	Wine grape	cytosol	34.29	50.6
PGSC0003DMT400007216	Potato	cytosol	35.51	49.71
KRH33794	Soybean	cytosol	35.1	48.31
KXG19796	Sorghum	cytosol	27.35	46.85
EER88239	Sorghum	cytosol	26.94	46.15
EER88238	Sorghum	cytosol	25.71	45.99
EER88241	Sorghum	cytosol	26.53	45.45
EES12041	Sorghum	cytosol	26.53	45.14
EES01186	Sorghum	cytosol	24.9	44.85
EER88235	Sorghum	cytosol	26.12	44.76
KXG19795	Sorghum	cytosol	26.12	44.76
KXG19794	Sorghum	cytosol	26.12	44.76
EER97870	Sorghum	cytosol	25.71	44.06
EER95773	Sorghum	cytosol	25.71	43.75
EES19980	Sorghum	cytosol	24.08	43.07
KRH02405	Soybean	cytosol	28.57	42.68
KXG19797	Sorghum	cytosol	15.1	42.53
EER89876	Sorghum	cytosol	26.53	42.21
EER96121	Sorghum	nucleus	24.49	41.96
EER97867	Sorghum	cytosol	24.08	41.55
OQU88323	Sorghum	cytosol	24.08	41.55
EER96122	Sorghum	nucleus	24.08	41.26
EES00076	Sorghum	cytosol	28.57	40.94
KRH50684	Soybean	cytosol	27.35	40.85
EES11575	Sorghum	cytosol	18.37	39.82
EER97866	Sorghum	cytosol	22.86	39.44
AT5G49600.1	Thale cress	cytosol	26.12	37.43
CDY05614	Canola	cytosol	24.9	36.53
CDY33893	Canola	cytosol	24.9	36.31
CDX86223	Canola	cytosol	25.31	36.26
Bra010024.1-P	Field mustard	cytosol	25.31	36.26
CDX85421	Canola	cytosol	24.9	35.88
Bra020626.1-P	Field mustard	cytosol	24.9	35.67
OQU88325	Sorghum	cytosol	22.04	33.75
EER95774	Sorghum	cytosol	19.59	33.57
EER91364	Sorghum	cytosol	25.71	32.81
EER97868	Sorghum	extracellular	12.65	29.81

Protein Annotations

EnsemblPlants:EES16171	EnsemblPlantsGene:SORBI_3008G131200	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF10	PFAM:PF04398	ProteinID:EES16171	ProteinID:EES16171.1	RefSeq:XP_002442333.1
SEG:seg	SUPFAM:SSF141562	unigene:Sbi.17837	UniParc:UPI0001A88584	UniProt:C5YPU7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr8:+:55707544..55714682

Molecular Weight (calculated)

25489.2 Da

IEP (calculated)

5.092

GRAVY (calculated)

-0.281

Length

245 amino acids

Sequence
(BLAST)

001: MTLTIPDDVR AKAEIYLGDE AGQEKTRLLL HETGLPSGLL PLQDIIECGY VEETGFVWLK QRRKVDHYFA KAGRHVSYGA EVSAVADKGR LKKITGVKAK
101: EMLIWVTLHE ICVDDPPQGK LHCKAIGGLS RSFPVEAFEA NDGRVVVPRN VGGCAGAGAA AAAAAAGNGN GVVVGAAEEE GKKKEAAAEE EGKKEDAAAA
201: AVGEDGGKDA AAAANGVDKV EEKLKEMSTG GDQQVVQGEA VAAKN

Best Arabidopsis Sequence Match ( AT1G09310.1 )
(BLAST)

001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.