CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19796	Sorghum	cytosol	99.27	95.1
EER88239	Sorghum	cytosol	98.54	94.41
Zm00001d018682_P001	Maize	cytosol	91.97	88.11
EER97870	Sorghum	cytosol	91.24	87.41
KXG19797	Sorghum	cytosol	55.47	87.36
EES11575	Sorghum	cytosol	71.53	86.73
Zm00001d018683_P001	Maize	cytosol	90.51	86.71
EES12041	Sorghum	cytosol	89.78	85.42
EER88241	Sorghum	cytosol	89.05	85.31
Os07t0119800-00	Rice	cytosol	89.05	85.31
KXG19795	Sorghum	cytosol	87.59	83.92
EER88235	Sorghum	cytosol	87.59	83.92
KXG19794	Sorghum	cytosol	87.59	83.92
Os07t0120500-00	Rice	cytosol	86.86	83.8
EER96121	Sorghum	nucleus	86.86	83.22
Os07t0120650-01	Rice	cytosol	86.13	83.1
EER95773	Sorghum	cytosol	86.86	82.64
EER96122	Sorghum	nucleus	86.13	82.52
Os07t0120300-00	Rice	cytosol	85.4	82.39
Os07t0120100-01	Rice	cytosol	84.67	81.69
Os07t0118200-00	Rice	cytosol	82.48	79.58
Os07t0118250-00	Rice	cytosol	79.56	76.76
Os07t0120000-00	Rice	cytosol	78.83	76.06
TraesCS5A01G517300.1	Wheat	cytosol	78.83	75.0
OQU88323	Sorghum	cytosol	76.64	73.94
EER97867	Sorghum	cytosol	76.64	73.94
TraesCS4D01G343700.1	Wheat	cytosol	76.64	72.92
HORVU4Hr1G085120.1	Barley	cytosol	76.64	72.41
TraesCS5A01G517400.1	Wheat	cytosol	75.18	71.53
TraesCS5A01G517600.1	Wheat	cytosol	74.45	70.34
TraesCS4B01G349000.1	Wheat	cytosol	73.72	69.18
EER97866	Sorghum	cytosol	71.53	69.01
EER95774	Sorghum	cytosol	69.34	66.43
GSMUA_Achr9P04160_001	Banana	cytosol	68.61	65.73
GSMUA_AchrUn_...	Banana	cytosol	54.01	64.91
GSMUA_AchrUn_...	Banana	cytosol	54.01	64.91
GSMUA_AchrUn_...	Banana	cytosol	52.55	63.16
OQU88325	Sorghum	cytosol	69.34	59.38
EER97868	Sorghum	extracellular	40.88	53.85
EES00076	Sorghum	cytosol	53.28	42.69
EES01186	Sorghum	cytosol	41.61	41.91
EES19980	Sorghum	cytosol	40.15	40.15
EER89876	Sorghum	cytosol	44.53	39.61
EES08981	Sorghum	cytosol	41.61	33.93
EER91364	Sorghum	cytosol	39.42	28.12
EES16171	Sorghum	cytosol	45.99	25.71

Protein Annotations

EnsemblPlants:EER88238	EnsemblPlantsGene:SORBI_3010G117400	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF26	PFAM:PF04398	ProteinID:EER88238	ProteinID:EER88238.1	RefSeq:XP_002436871.1
SEG:seg	SUPFAM:SSF141562	UniParc:UPI0001A895A1	UniProt:C5Z8L6	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr10:+:12881860..12882291

Molecular Weight (calculated)

14964.2 Da

IEP (calculated)

7.511

GRAVY (calculated)

-0.133

Length

137 amino acids

Sequence
(BLAST)

001: MASQAIESHR AGAEIVTGDA ACRKKSVELL EELGLPKGLL PMEDIQEFGY NLLVQRKKKV EHTFKKIKQT VSYAAEVTAI AEKGKLGKIT GVKTKELMLW
101: LSVVEVYVPE ASPEKVTFKT GTGLSDTFDA TAFAFGE

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.