CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19796	Sorghum	cytosol	99.3	99.3
EER88238	Sorghum	cytosol	94.41	98.54
Zm00001d018682_P001	Maize	cytosol	90.91	90.91
EER97870	Sorghum	cytosol	90.21	90.21
Zm00001d018683_P001	Maize	cytosol	89.51	89.51
EER88241	Sorghum	cytosol	88.81	88.81
KXG19797	Sorghum	cytosol	53.85	88.51
EES12041	Sorghum	cytosol	88.81	88.19
KXG19794	Sorghum	cytosol	88.11	88.11
EER88235	Sorghum	cytosol	88.11	88.11
Os07t0119800-00	Rice	cytosol	88.11	88.11
KXG19795	Sorghum	cytosol	88.11	88.11
Os07t0120500-00	Rice	cytosol	86.71	87.32
EER95773	Sorghum	cytosol	87.41	86.81
EER96121	Sorghum	nucleus	86.01	86.01
EER96122	Sorghum	nucleus	86.01	86.01
Os07t0120650-01	Rice	cytosol	85.31	85.92
Os07t0120300-00	Rice	cytosol	85.31	85.92
EES11575	Sorghum	cytosol	67.83	85.84
Os07t0120100-01	Rice	cytosol	84.62	85.21
Os07t0118200-00	Rice	cytosol	82.52	83.1
Os07t0118250-00	Rice	cytosol	79.72	80.28
Os07t0120000-00	Rice	cytosol	79.02	79.58
TraesCS5A01G517300.1	Wheat	cytosol	78.32	77.78
EER97867	Sorghum	cytosol	76.92	77.46
OQU88323	Sorghum	cytosol	76.92	77.46
HORVU4Hr1G085120.1	Barley	cytosol	76.92	75.86
TraesCS4D01G343700.1	Wheat	cytosol	76.22	75.69
TraesCS5A01G517400.1	Wheat	cytosol	74.83	74.31
TraesCS5A01G517600.1	Wheat	cytosol	74.83	73.79
TraesCS4B01G349000.1	Wheat	cytosol	73.43	71.92
EER97866	Sorghum	cytosol	70.63	71.13
GSMUA_Achr9P04160_001	Banana	cytosol	69.23	69.23
EER95774	Sorghum	cytosol	68.53	68.53
GSMUA_AchrUn_...	Banana	cytosol	52.45	65.79
GSMUA_AchrUn_...	Banana	cytosol	52.45	65.79
GSMUA_AchrUn_...	Banana	cytosol	51.05	64.04
OQU88325	Sorghum	cytosol	68.53	61.25
EER97868	Sorghum	extracellular	41.96	57.69
EES00076	Sorghum	cytosol	53.85	45.03
EES01186	Sorghum	cytosol	42.66	44.85
EES19980	Sorghum	cytosol	41.26	43.07
EER89876	Sorghum	cytosol	46.15	42.86
EES08981	Sorghum	cytosol	42.66	36.31
EER91364	Sorghum	cytosol	40.56	30.21
EES16171	Sorghum	cytosol	46.15	26.94

Protein Annotations

EnsemblPlants:EER88239	EnsemblPlantsGene:SORBI_3010G117500	EntrezGene:8073734	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF26	PFAM:PF04398	ProteinID:EER88239	ProteinID:EER88239.1
RefSeq:XP_002436872.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI0001A895A2	UniProt:C5Z8L7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr10:+:12927459..12928171

Molecular Weight (calculated)

15741.1 Da

IEP (calculated)

8.450

GRAVY (calculated)

-0.141

Length

143 amino acids

Sequence
(BLAST)

001: MASQAIESHR AGAEIVTGDA ACRKKSVELL EELGLPKGLL PMEDIQEFGY NRVTGFLWLV QRKKKVEHTF KKIKQTVSYA TEVTAIAEKG KLGKITGVKT
101: KELMLWLSVV EVYVPEASPE KVTFKTGTGL SDTFDATAFA FGE

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.