CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052772_P001	Maize	cytosol	90.48	89.41
TraesCS4D01G143300.1	Wheat	cytosol	82.14	82.14
TraesCSU01G068000.1	Wheat	cytosol	81.55	81.55
Os11t0683600-00	Rice	cytosol	80.95	80.95
Zm00001d048649_P001	Maize	cytosol	80.95	72.73
TraesCS4A01G171900.1	Wheat	mitochondrion	80.95	62.39
EES01186	Sorghum	cytosol	41.07	50.74
VIT_14s0060g00900.t01	Wine grape	cytosol	49.4	50.0
EES19980	Sorghum	cytosol	40.48	49.63
GSMUA_Achr3P12720_001	Banana	cytosol	45.83	47.24
KRH33794	Soybean	cytosol	48.81	46.07
Solyc01g100770.2.1	Tomato	cytosol	42.26	43.29
Solyc01g100760.2.1	Tomato	cytosol	42.26	43.29
EER88239	Sorghum	cytosol	36.31	42.66
EER88241	Sorghum	cytosol	36.31	42.66
KXG19795	Sorghum	cytosol	36.31	42.66
KXG19794	Sorghum	cytosol	36.31	42.66
KXG19796	Sorghum	cytosol	35.71	41.96
Solyc01g100750.2.1	Tomato	cytosol	40.48	41.72
EES12041	Sorghum	cytosol	35.71	41.67
EER88238	Sorghum	cytosol	33.93	41.61
PGSC0003DMT400007217	Potato	cytosol	41.07	41.32
EER88235	Sorghum	cytosol	35.12	41.26
EER96121	Sorghum	nucleus	34.52	40.56
KXG19797	Sorghum	cytosol	20.83	40.23
EER97870	Sorghum	cytosol	33.93	39.86
EER96122	Sorghum	nucleus	33.93	39.86
KRH02405	Soybean	cytosol	38.69	39.63
EER97867	Sorghum	cytosol	33.33	39.44
OQU88323	Sorghum	cytosol	33.33	39.44
EES11575	Sorghum	cytosol	26.19	38.94
PGSC0003DMT400007216	Potato	cytosol	40.48	38.86
KRH50684	Soybean	cytosol	37.5	38.41
EER95773	Sorghum	cytosol	32.14	37.5
EER97866	Sorghum	cytosol	31.55	37.32
EER89876	Sorghum	cytosol	33.33	36.36
EES16171	Sorghum	cytosol	52.38	35.92
EES00076	Sorghum	cytosol	35.71	35.09
EER95774	Sorghum	cytosol	28.57	33.57
AT5G49600.1	Thale cress	cytosol	33.93	33.33
OQU88325	Sorghum	cytosol	31.55	33.12
CDY05614	Canola	cytosol	31.55	31.74
Bra020626.1-P	Field mustard	cytosol	32.14	31.58
CDY33893	Canola	cytosol	31.55	31.55
EER91364	Sorghum	cytosol	35.12	30.73
CDX86223	Canola	cytosol	30.95	30.41
Bra010024.1-P	Field mustard	cytosol	30.95	30.41
CDX85421	Canola	cytosol	30.36	30.0
EER97868	Sorghum	extracellular	17.26	27.88

Protein Annotations

EnsemblPlants:EES08981	EnsemblPlantsGene:SORBI_3005G216900	EntrezGene:8085986	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF29	PFAM:PF04398	ProteinID:EES08981	ProteinID:EES08981.1
RefSeq:XP_002449993.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI0001A863CE	UniProt:C5Y803	MapMan:35.2

Description

hypothetical protein

Coordinates

chr5:+:70266948..70267454

Molecular Weight (calculated)

18770.2 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.167

Length

168 amino acids

Sequence
(BLAST)

001: MALIADELKA KAEVYYGDEM CQMCTQLLLR EAGLPNGLLP LKDLIECGYV QETGYVWLKQ SKRVDHNFQS LGRLVSYGTE ITGYAEKGRI KKIKGIKTRE
101: LMLWVPVEEI ALDDPATGKL ICKSIAGITK TFPASAFHVP EKENVKMNCA APKPVVLMER TPRVVKNN

Best Arabidopsis Sequence Match ( AT1G56580.1 )
(BLAST)

001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA

Arabidopsis Description

SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.