Factsheet for Zm00001d048649_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08981	Sorghum	cytosol	72.73	80.95
Zm00001d052772_P001	Maize	cytosol	72.73	80.0
TraesCS4D01G143300.1	Wheat	cytosol	65.78	73.21
TraesCSU01G068000.1	Wheat	cytosol	65.24	72.62
Os11t0683600-00	Rice	cytosol	65.24	72.62
TraesCS4A01G171900.1	Wheat	mitochondrion	64.71	55.5
GSMUA_Achr3P12720_001	Banana	cytosol	42.78	49.08
Zm00001d039083_P001	Maize	cytosol	35.83	48.55
Zm00001d044034_P001	Maize	cytosol	35.29	48.53
VIT_14s0060g00900.t01	Wine grape	cytosol	42.25	47.59
Zm00001d002014_P001	Maize	cytosol	34.22	44.44
Zm00001d002017_P001	Maize	cytosol	33.69	44.06
Zm00001d002015_P001	Maize	cytosol	33.69	44.06
Zm00001d002016_P001	Maize	cytosol	33.69	43.75
Zm00001d018682_P001	Maize	cytosol	33.16	43.36
Zm00001d030642_P001	Maize	mitochondrion	27.27	42.86
Zm00001d018683_P001	Maize	cytosol	32.62	42.66
KRH33794	Soybean	cytosol	40.11	42.13
Solyc01g100760.2.1	Tomato	cytosol	35.83	40.85
Solyc01g100770.2.1	Tomato	cytosol	34.76	39.63
PGSC0003DMT400007217	Potato	cytosol	35.29	39.52
Solyc01g100750.2.1	Tomato	cytosol	34.22	39.26
PGSC0003DMT400007216	Potato	cytosol	34.76	37.14
Zm00001d041578_P001	Maize	cytosol, mitochondrion	44.38	37.05
Zm00001d037018_P001	Maize	cytosol, extracellular, mitochondrion, plastid	31.02	36.02
KRH02405	Soybean	cytosol	31.02	35.37
Zm00001d032443_P001	Maize	extracellular	34.22	34.78
KRH50684	Soybean	cytosol	29.95	34.15
Zm00001d008910_P001	Maize	cytosol	21.39	31.75
AT5G49600.1	Thale cress	cytosol	28.34	30.99
CDY05614	Canola	cytosol	26.74	29.94
Bra020626.1-P	Field mustard	cytosol	27.27	29.82
CDY33893	Canola	cytosol	26.74	29.76
CDX86223	Canola	cytosol	25.67	28.07
Bra010024.1-P	Field mustard	cytosol	25.67	28.07
CDX85421	Canola	cytosol	25.13	27.65
Zm00001d002018_P001	Maize	cytosol	33.69	26.81

Protein Annotations

EMBL:EU971849	EnsemblPlants:Zm00001d048649_P001	EnsemblPlants:Zm00001d048649_T001	EnsemblPlantsGene:Zm00001d048649	EntrezGene:100278076	Gene3D:2.30.240.10
InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF29	PFAM:PF04398
ProteinID:AQK48330.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI000182EB19	UniProt:B6U3N4	MapMan:35.2

Description

Expressed protein; protein

Coordinates

chr4:-:2612412..2612975

Molecular Weight (calculated)

20091.4 Da

IEP (calculated)

7.839

GRAVY (calculated)

-0.043

Length

187 amino acids

Sequence
(BLAST)

001: MALVADDDAE LKAKAKAKAE VYYGDEACQL CAQLLLREAG LPNGLLPLED LTECGYVQET GYVWLKQGRR VDHVFRSLGR LVSYGAEITG YAEKGRIRKV
101: KGIKTRELML WVPVEEIAAL GDPAAGGKLV CKSVAGITRT FPASAFHVPE KAAAAEEVKV DCARAPPATP VLVLMDRSGA PPVVKNN

Best Arabidopsis Sequence Match ( AT1G56580.1 )
(BLAST)

001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA

Arabidopsis Description

SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.