Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05614 | Canola | cytosol | 94.64 | 95.21 |
| Bra020626.1-P | Field mustard | cytosol | 93.45 | 91.81 |
| AT5G49600.1 | Thale cress | cytosol | 86.31 | 84.8 |
| CDX85421 | Canola | cytosol | 82.74 | 81.76 |
| CDX86223 | Canola | cytosol | 82.74 | 81.29 |
| KRH50684 | Soybean | cytosol | 50.0 | 51.22 |
| KRH02405 | Soybean | cytosol | 48.21 | 49.39 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 45.24 | 45.78 |
| Solyc01g100750.2.1 | Tomato | cytosol | 44.05 | 45.4 |
| Solyc01g100760.2.1 | Tomato | cytosol | 42.86 | 43.9 |
| PGSC0003DMT400007217 | Potato | cytosol | 43.45 | 43.71 |
| CDY57268 | Canola | cytosol | 36.9 | 43.06 |
| Solyc01g100770.2.1 | Tomato | cytosol | 41.67 | 42.68 |
| CDX93512 | Canola | cytosol | 35.71 | 42.55 |
| CDY04373 | Canola | cytosol | 36.31 | 42.36 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 40.48 | 41.72 |
| PGSC0003DMT400007216 | Potato | cytosol | 41.67 | 40.0 |
| CDX95276 | Canola | cytosol | 36.31 | 39.35 |
| CDY41704 | Canola | cytosol | 35.71 | 38.71 |
| CDY48399 | Canola | cytosol | 36.31 | 36.75 |
| CDY31099 | Canola | cytosol | 36.31 | 36.09 |
| Zm00001d030642_P001 | Maize | mitochondrion | 25.0 | 35.29 |
| CDY32168 | Canola | cytosol | 35.12 | 35.12 |
| Os11t0683600-00 | Rice | cytosol | 34.52 | 34.52 |
| CDX87732 | Canola | cytosol | 29.17 | 34.27 |
| CDY43960 | Canola | cytosol | 28.57 | 34.04 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 33.93 | 33.93 |
| CDX90222 | Canola | cytosol | 19.64 | 33.67 |
| CDY35153 | Canola | cytosol | 28.57 | 33.33 |
| TraesCSU01G068000.1 | Wheat | cytosol | 33.33 | 33.33 |
| TraesCS5A01G086600.1 | Wheat | cytosol | 34.52 | 32.58 |
| CDY62357 | Canola | cytosol | 27.38 | 31.94 |
| CDY33463 | Canola | cytosol | 27.38 | 31.94 |
| EES08981 | Sorghum | cytosol | 31.55 | 31.55 |
| CDY35265 | Canola | cytosol | 26.19 | 31.43 |
| Zm00001d052772_P001 | Maize | cytosol | 31.55 | 31.18 |
| CDY10988 | Canola | cytosol | 28.57 | 30.57 |
| CDX92616 | Canola | cytosol | 28.57 | 30.57 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 36.9 | 30.54 |
| CDY03486 | Canola | cytosol | 27.98 | 29.94 |
| CDY34258 | Canola | cytosol | 27.38 | 29.3 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 35.71 | 28.04 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 35.71 | 27.27 |
| Zm00001d041578_P001 | Maize | cytosol, mitochondrion | 36.31 | 27.23 |
| Zm00001d048649_P001 | Maize | cytosol | 29.76 | 26.74 |
| CDY03234 | Canola | plastid | 27.98 | 26.7 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 33.33 | 25.69 |
| EES16171 | Sorghum | cytosol | 36.31 | 24.9 |
| HORVU5Hr1G022550.1 | Barley | plastid | 35.12 | 22.18 |
Protein Annotations
| EnsemblPlants:CDY33893 | EnsemblPlantsGene:GSBRNA2T00055395001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF34 | PFAM:PF04398 | ProteinID:CDY33893 | ProteinID:CDY33893.1 | SUPFAM:SSF141562 |
| UniParc:UPI0004EEFA81 | UniProt:A0A078HAM8 | MapMan:35.2 | : | : | : |
Description
BnaA02g30940DBnaA02g30940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAM8]
Coordinates
chrLK032324:-:62837..63343
Molecular Weight (calculated)
19422.6 Da
IEP (calculated)
9.716
GRAVY (calculated)
-0.476
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTEAMKAKA EVYHGDKTCR DKFRSLLSQI GLPNRLLSNQ EIEECGYVKD TGFVWLKHKK KDEKKRYQDL FRFDNVAVCF EDEVTAYFEP NKIKKLTGVK
101: AKEFMVRISL GEILVNRSSG LITFKTHVGL LSKSLPLSVF EDVQADHDIK EKTKKVQQKL NNTKICLY
101: AKEFMVRISL GEILVNRSSG LITFKTHVGL LSKSLPLSVF EDVQADHDIK EKTKKVQQKL NNTKICLY
001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
Arabidopsis Description
Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.