Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017568.1-P | Field mustard | cytosol | 98.61 | 98.61 |
| AT5G46230.1 | Thale cress | cytosol | 83.33 | 83.92 |
| CDY43960 | Canola | cytosol | 79.17 | 80.85 |
| CDY03234 | Canola | plastid | 97.92 | 80.11 |
| CDX87732 | Canola | cytosol | 78.47 | 79.02 |
| CDY33463 | Canola | cytosol | 77.78 | 77.78 |
| CDY62357 | Canola | cytosol | 77.08 | 77.08 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 56.25 | 57.86 |
| CDX90222 | Canola | cytosol | 38.89 | 57.14 |
| PGSC0003DMT400024987 | Potato | cytosol | 54.86 | 56.43 |
| Solyc02g070500.1.1 | Tomato | cytosol | 53.47 | 52.38 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 54.17 | 52.35 |
| CDY35265 | Canola | cytosol | 50.0 | 51.43 |
| PGSC0003DMT400054524 | Potato | cytosol | 52.08 | 51.37 |
| TraesCSU01G231600.1 | Wheat | cytosol | 41.67 | 47.62 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 48.61 | 46.67 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 48.61 | 46.67 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 47.92 | 46.31 |
| EER89876 | Sorghum | cytosol | 49.31 | 46.1 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 47.22 | 45.64 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 47.22 | 45.64 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 47.22 | 45.33 |
| TraesCSU01G243200.1 | Wheat | cytosol | 47.22 | 45.33 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 47.22 | 44.74 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 46.53 | 44.67 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 49.31 | 44.65 |
| KRH11189 | Soybean | cytosol | 50.0 | 44.44 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 47.22 | 44.16 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 44.44 | 44.14 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 48.61 | 44.03 |
| GSMUA_Achr10P... | Banana | cytosol | 47.22 | 43.59 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 47.92 | 43.4 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 47.22 | 43.31 |
| EES00076 | Sorghum | cytosol | 51.39 | 43.27 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 47.92 | 42.86 |
| CDY57268 | Canola | cytosol | 42.36 | 42.36 |
| CDY04373 | Canola | cytosol | 42.36 | 42.36 |
| GSMUA_Achr10P... | Banana | cytosol | 44.44 | 42.11 |
| Zm00001d008910_P001 | Maize | cytosol | 36.81 | 42.06 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 45.83 | 42.04 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 34.03 | 41.53 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 45.14 | 41.4 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 45.14 | 41.4 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 47.92 | 41.32 |
| CDX93512 | Canola | cytosol | 40.28 | 41.13 |
| CDY41704 | Canola | cytosol | 42.36 | 39.35 |
| CDX95276 | Canola | cytosol | 42.36 | 39.35 |
| CDY48399 | Canola | cytosol | 43.06 | 37.35 |
| CDX92616 | Canola | cytosol | 40.28 | 36.94 |
| CDY10988 | Canola | cytosol | 39.58 | 36.31 |
| CDY03486 | Canola | cytosol | 38.19 | 35.03 |
| CDY34258 | Canola | cytosol | 38.19 | 35.03 |
| CDY32168 | Canola | cytosol | 40.28 | 34.52 |
| CDY31099 | Canola | cytosol | 40.28 | 34.32 |
| Os06t0538900-01 | Rice | plastid | 43.75 | 33.16 |
| CDY05614 | Canola | cytosol | 34.03 | 29.34 |
| HORVU3Hr1G028780.1 | Barley | plastid | 50.0 | 29.15 |
| CDY33893 | Canola | cytosol | 33.33 | 28.57 |
| CDX85421 | Canola | cytosol | 33.33 | 28.24 |
| CDX86223 | Canola | cytosol | 33.33 | 28.07 |
Protein Annotations
| EnsemblPlants:CDY35153 | EnsemblPlantsGene:GSBRNA2T00058040001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | PFAM:PF04398 | ProteinID:CDY35153 | ProteinID:CDY35153.1 | SUPFAM:SSF141562 |
| UniParc:UPI0004EE0F20 | UniProt:A0A078HEC3 | MapMan:35.2 | : | : | : |
Description
BnaA09g17900DBnaA09g17900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEC3]
Coordinates
chrLK032347:-:97171..97605
Molecular Weight (calculated)
16297.5 Da
IEP (calculated)
9.116
GRAVY (calculated)
-0.547
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLETKPDQ RQGAEIFNGG STCKQKANEI LSTMNLPKGL LPLDNMTEIG HNKTTGYIWI KINKNVQHRF KAIGRNVSYD SEVTAFVENR RMRSLTGIKS
101: KELLLWATIS EIFVNDQDQT KITFANPTGL SRTFPVTAFE EEEK
101: KELLLWATIS EIFVNDQDQT KITFANPTGL SRTFPVTAFE EEEK
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Arabidopsis Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.