Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 79.62 | 80.13 |
| GSMUA_Achr10P... | Banana | cytosol | 77.07 | 79.61 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 60.51 | 63.76 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 59.87 | 63.09 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 63.06 | 62.26 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 59.24 | 62.0 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 59.24 | 61.18 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 59.87 | 61.04 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 61.78 | 61.01 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 57.96 | 60.67 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 57.32 | 60.4 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 61.15 | 60.38 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 45.22 | 60.17 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 57.32 | 60.0 |
| PGSC0003DMT400054524 | Potato | cytosol | 55.41 | 59.59 |
| TraesCSU01G243200.1 | Wheat | cytosol | 56.69 | 59.33 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 56.05 | 59.06 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 54.14 | 58.62 |
| Solyc02g070500.1.1 | Tomato | cytosol | 54.78 | 58.5 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 55.41 | 58.0 |
| TraesCSU01G231600.1 | Wheat | cytosol | 46.5 | 57.94 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 50.96 | 57.14 |
| PGSC0003DMT400024987 | Potato | cytosol | 50.96 | 57.14 |
| GSMUA_Achr4P14140_001 | Banana | cytosol | 40.13 | 56.76 |
| EES00076 | Sorghum | cytosol | 61.78 | 56.73 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 51.59 | 56.64 |
| GSMUA_Achr7P26220_001 | Banana | cytosol | 50.96 | 56.34 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 59.87 | 56.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.76 | 56.14 |
| GSMUA_Achr7P26210_001 | Banana | cytosol | 50.32 | 55.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.13 | 55.26 |
| GSMUA_Achr7P26230_001 | Banana | cytosol | 49.68 | 54.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.85 | 53.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.49 | 53.45 |
| Zm00001d008910_P001 | Maize | cytosol | 42.68 | 53.17 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.04 | 53.1 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 52.87 | 52.87 |
| CDX87732 | Canola | cytosol | 47.77 | 52.45 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 52.23 | 52.23 |
| CDY62357 | Canola | cytosol | 47.77 | 52.08 |
| CDY33463 | Canola | cytosol | 47.77 | 52.08 |
| CDY43960 | Canola | cytosol | 46.5 | 51.77 |
| Bra022026.1-P | Field mustard | cytosol | 46.5 | 51.77 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 51.59 | 51.59 |
| Bra025029.1-P | Field mustard | cytosol | 47.13 | 51.39 |
| CDX90222 | Canola | cytosol | 31.85 | 51.02 |
| Bra010803.1-P | Field mustard | cytosol | 31.85 | 51.02 |
| KRH11189 | Soybean | cytosol | 51.59 | 50.0 |
| EER89876 | Sorghum | cytosol | 47.77 | 48.7 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 49.04 | 47.83 |
| AT5G46230.1 | Thale cress | cytosol | 43.31 | 47.55 |
| CDY35153 | Canola | cytosol | 43.31 | 47.22 |
| Bra017568.1-P | Field mustard | cytosol | 42.68 | 46.53 |
| CDY35265 | Canola | cytosol | 38.85 | 43.57 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 44.59 | 42.94 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 42.68 | 42.41 |
| Os06t0538900-01 | Rice | plastid | 49.68 | 41.05 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 35.67 | 40.88 |
| HORVU3Hr1G028780.1 | Barley | plastid | 61.78 | 39.27 |
| CDY03234 | Canola | plastid | 43.31 | 38.64 |
| AT1G30020.1 | Thale cress | cytosol | 33.76 | 33.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P13960_001 | EnsemblPlants:GSMUA_Achr7T13960_001 | EnsemblPlantsGene:GSMUA_Achr7G13960_001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 |
| UniParc:UPI000294D8E5 | UniProt:M0THD3 | MapMan:35.2 | : | : | : |
Description
DUF538 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G13960_001]
Coordinates
chr7:-:11187155..11187782
Molecular Weight (calculated)
17552.9 Da
IEP (calculated)
5.385
GRAVY (calculated)
-0.452
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTQALIESQ REGAEVSYGA DICKEQSMSL LEGIHLPKGL LPLAAIEEVG YNRATGFVWL KQKKSTTHVF KAIGKTVSYA QEVTAFVEDR RMKRMTGVKS
101: REFLIWISVS DMYIDDPESK RITFKTPAGI GRSFPVSAFQ AEEEEEEKPE AKEGDGK
101: REFLIWISVS DMYIDDPESK RITFKTPAGI GRSFPVSAFQ AEEEEEEKPE AKEGDGK
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Arabidopsis Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.