Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35265 | Canola | cytosol | 66.88 | 75.0 |
| Bra010803.1-P | Field mustard | cytosol | 43.95 | 70.41 |
| CDX90222 | Canola | cytosol | 43.31 | 69.39 |
| TraesCSU01G243200.1 | Wheat | cytosol | 42.04 | 44.0 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 42.04 | 44.0 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 32.48 | 43.22 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 40.76 | 42.95 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 41.4 | 42.76 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 40.76 | 42.67 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 40.13 | 42.0 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 40.13 | 42.0 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 39.49 | 41.61 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 39.49 | 41.61 |
| TraesCSU01G231600.1 | Wheat | cytosol | 33.12 | 41.27 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 38.85 | 40.94 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 40.13 | 40.91 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 36.31 | 40.71 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 37.58 | 40.69 |
| AT5G46230.1 | Thale cress | cytosol | 36.31 | 39.86 |
| PGSC0003DMT400054524 | Potato | cytosol | 36.94 | 39.73 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 40.13 | 39.62 |
| Solyc02g070500.1.1 | Tomato | cytosol | 36.94 | 39.46 |
| PGSC0003DMT400024987 | Potato | cytosol | 35.03 | 39.29 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 39.49 | 38.99 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 39.49 | 38.99 |
| KRH11189 | Soybean | cytosol | 38.85 | 37.65 |
| GSMUA_Achr10P... | Banana | cytosol | 35.67 | 36.84 |
| EES00076 | Sorghum | cytosol | 40.13 | 36.84 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 38.85 | 36.53 |
| GSMUA_Achr10P... | Banana | cytosol | 35.67 | 35.9 |
| EER89876 | Sorghum | cytosol | 35.03 | 35.71 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 35.03 | 35.03 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 34.39 | 34.39 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 34.39 | 34.39 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 33.76 | 33.76 |
| Zm00001d008910_P001 | Maize | cytosol | 26.75 | 33.33 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 33.76 | 32.92 |
| AT1G56580.1 | Thale cress | cytosol | 31.85 | 30.12 |
| AT1G09310.1 | Thale cress | cytosol | 33.12 | 29.05 |
| Os06t0538900-01 | Rice | plastid | 35.03 | 28.95 |
| HORVU3Hr1G028780.1 | Barley | plastid | 40.76 | 25.91 |
| AT4G24130.1 | Thale cress | cytosol | 25.48 | 25.48 |
| AT5G49600.1 | Thale cress | cytosol | 27.39 | 25.15 |
Protein Annotations
| Gene3D:2.30.240.10 | MapMan:35.2 | EntrezGene:839881 | ProteinID:AAG52047.1 | ProteinID:AEE31168.1 | ArrayExpress:AT1G30020 |
| EnsemblPlantsGene:AT1G30020 | RefSeq:AT1G30020 | TAIR:AT1G30020 | RefSeq:AT1G30020-TAIR-G | EnsemblPlants:AT1G30020.1 | TAIR:AT1G30020.1 |
| InterPro:At5g01610-like | InterPro:DUF538 | GO:GO:0008150 | InterPro:IPR036758 | RefSeq:NP_174295.1 | PFAM:PF04398 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0025022 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | UniProt:Q9C8R7 | SUPFAM:SSF141562 |
| UniParc:UPI00000A5F9C | SEG:seg | : | : | : | : |
Description
Uncharacterized protein T1P2.11 [Source:UniProtKB/TrEMBL;Acc:Q9C8R7]
Coordinates
chr1:-:10515874..10516347
Molecular Weight (calculated)
18591.1 Da
IEP (calculated)
10.240
GRAVY (calculated)
-0.385
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MALREMIIDE SDDIESYSDQ SLCLDKAKEL LALIKLPTGL LPLKDMTEVG YNKTKGFVWM RMRSKIEHTF REIGRRVLYD TEITAFVEDR RMRRLTGVKS
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.