Factsheet for Os01t0210600-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular, cytosol

Predictor Summary:

nucleus 1
cytosol 5
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 18372294
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G132500.1	Wheat	cytosol	71.86	80.54
TraesCS3D01G148700.1	Wheat	cytosol	71.26	79.87
TraesCS3A01G132600.1	Wheat	cytosol	74.85	78.62
TraesCS3D01G148900.1	Wheat	cytosol	74.85	78.62
TraesCS3B01G167000.1	Wheat	cytosol	74.25	77.99
EES00076	Sorghum	cytosol	78.44	76.61
TraesCS3B01G554700.1	Wheat	cytosol	68.26	76.51
TraesCS3B01G579600.1	Wheat	cytosol	68.26	76.0
TraesCS3B01G594700.1	Wheat	cytosol	68.26	76.0
TraesCS3B01G606500.1	Wheat	cytosol	68.86	74.68
TraesCS3B01G586700.1	Wheat	cytosol	67.07	74.67
TraesCSU01G243200.1	Wheat	cytosol	67.07	74.67
TraesCS3B01G586600.1	Wheat	cytosol	52.69	74.58
TraesCS3B01G554600.1	Wheat	cytosol	66.47	74.0
TraesCS3B01G605800.1	Wheat	cytosol	67.07	73.68
TraesCSU01G231600.1	Wheat	cytosol	55.09	73.02
TraesCS3B01G053600.1	Wheat	cytosol	61.68	71.03
Zm00001d008910_P001	Maize	cytosol	52.69	69.84
GSMUA_Achr10P...	Banana	cytosol	58.08	63.82
GSMUA_Achr10P...	Banana	cytosol	58.08	62.18
GSMUA_Achr7P13960_001	Banana	cytosol	56.29	59.87
VIT_10s0003g03300.t01	Wine grape	cytosol	49.1	55.03
Os07t0118200-00	Rice	cytosol	46.11	54.23
Os07t0120100-01	Rice	cytosol	46.11	54.23
Bra010803.1-P	Field mustard	cytosol	31.74	54.08
Os07t0120300-00	Rice	cytosol	45.51	53.52
PGSC0003DMT400054524	Potato	cytosol	46.71	53.42
CDX90222	Canola	cytosol	31.14	53.06
Solyc02g070500.1.1	Tomato	cytosol	46.71	53.06
Os07t0119800-00	Rice	cytosol	44.91	52.45
Solyc08g016580.1.1	Tomato	cytosol, extracellular	43.71	52.14
Os07t0120500-00	Rice	cytosol	44.31	52.11
PGSC0003DMT400024987	Potato	cytosol	43.11	51.43
HORVU3Hr1G028780.1	Barley	plastid	76.05	51.42
Os07t0120650-01	Rice	cytosol	43.71	51.41
CDY35265	Canola	cytosol	41.92	50.0
CDY62357	Canola	cytosol	43.11	50.0
CDY33463	Canola	cytosol	42.52	49.31
Os07t0118250-00	Rice	cytosol	41.92	49.3
Os07t0120000-00	Rice	cytosol	41.92	49.3
Bra022026.1-P	Field mustard	cytosol	41.32	48.94
CDY43960	Canola	cytosol	41.32	48.94
Bra025029.1-P	Field mustard	cytosol	41.92	48.61
CDX87732	Canola	cytosol	41.32	48.25
AT5G46230.1	Thale cress	cytosol	41.32	48.25
CDY35153	Canola	cytosol	41.32	47.92
Bra017568.1-P	Field mustard	cytosol	41.32	47.92
Os11t0594700-00	Rice	nucleus	40.72	47.89
Os11t0594800-01	Rice	cytosol	40.72	47.89
KRH11189	Soybean	cytosol	45.51	46.91
Os06t0538900-01	Rice	plastid	49.1	43.16
Os01t0652700-00	Rice	cytosol	34.73	42.65
CDY03234	Canola	plastid	41.92	39.77
AT1G30020.1	Thale cress	cytosol	36.53	38.85
Os05t0573600-00	Rice	cytosol	31.14	37.68
Os11t0683600-00	Rice	cytosol	33.53	33.33
Os12t0563600-03	Rice	cytosol, plasma membrane	39.52	32.51
Os11t0595000-00	Rice	nucleus	36.53	30.35

Protein Annotations

EMBL:AK119774	EnsemblPlants:Os01t0210600-02	EnsemblPlantsGene:Os01g0210600	EntrezGene:4325559	Gene3D:2.30.240.10	InterPro:At5g01610-like
InterPro:DUF538	InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF7	PFAM:PF04398	ProteinID:BAA96147.1
ProteinID:BAA96189.1	ProteinID:BAF04283.1	ProteinID:BAS70985.1	RefSeq:XP_015614119.1	SEG:seg	SUPFAM:SSF141562
UniParc:UPI000009D89D	UniProt:Q9LE07	MapMan:35.2	:	:	:

Description

Protein of unknown function DUF538 family protein. (Os01t0210600-02)

Coordinates

chr1:-:6010862..6011818

Molecular Weight (calculated)

18151.9 Da

IEP (calculated)

9.033

GRAVY (calculated)

-0.229

Length

167 amino acids

Sequence
(BLAST)

001: MGSQAIEAHR EGAEVYHGAA LCAEKAVELL AEIHMPLGLL PLAEMEEVGY NRATGFVWLR QKKAITHTFK QISRQVSFAA EVTAFVEDRR MKRVTGAKTK
101: ELLIWVSLSD MFIDKDDASK ITFKTPTGLG RTYPVDAFAK EDDGKGKVPA AAAAANGKET AVNGKAK

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.