Factsheet for Bra017568.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35153	Canola	cytosol	98.61	98.61
AT5G46230.1	Thale cress	cytosol	83.33	83.92
Bra022026.1-P	Field mustard	cytosol	79.17	80.85
Bra025029.1-P	Field mustard	cytosol	77.78	77.78
Solyc08g016580.1.1	Tomato	cytosol, extracellular	56.25	57.86
Bra010803.1-P	Field mustard	cytosol	38.19	56.12
PGSC0003DMT400024987	Potato	cytosol	54.17	55.71
Solyc02g070500.1.1	Tomato	cytosol	53.47	52.38
VIT_10s0003g03300.t01	Wine grape	cytosol	54.17	52.35
PGSC0003DMT400054524	Potato	cytosol	52.78	52.05
TraesCSU01G231600.1	Wheat	cytosol	41.67	47.62
EER89876	Sorghum	cytosol	50.69	47.4
TraesCS3B01G554700.1	Wheat	cytosol	48.61	46.98
TraesCS3B01G594700.1	Wheat	cytosol	48.61	46.67
TraesCS3B01G586700.1	Wheat	cytosol	48.61	46.67
TraesCS3A01G132500.1	Wheat	cytosol	47.22	45.64
TraesCSU01G243200.1	Wheat	cytosol	47.22	45.33
TraesCS3B01G579600.1	Wheat	cytosol	47.22	45.33
KRH11189	Soybean	cytosol	50.69	45.06
TraesCS3D01G148700.1	Wheat	cytosol	46.53	44.97
TraesCS3B01G605800.1	Wheat	cytosol	47.22	44.74
TraesCS3B01G554600.1	Wheat	cytosol	46.53	44.67
TraesCS3B01G606500.1	Wheat	cytosol	47.22	44.16
TraesCS3B01G053600.1	Wheat	cytosol	44.44	44.14
TraesCS3A01G132600.1	Wheat	cytosol	48.61	44.03
GSMUA_Achr10P...	Banana	cytosol	47.22	43.59
TraesCS3D01G148900.1	Wheat	cytosol	47.92	43.4
EES00076	Sorghum	cytosol	51.39	43.27
Zm00001d037018_P001	Maize	cytosol, extracellular, mitochondrion, plastid	47.92	42.86
TraesCS3B01G167000.1	Wheat	cytosol	47.22	42.77
GSMUA_Achr7P13960_001	Banana	cytosol	46.53	42.68
TraesCS3B01G586600.1	Wheat	cytosol	34.72	42.37
GSMUA_Achr10P...	Banana	cytosol	44.44	42.11
Zm00001d008910_P001	Maize	cytosol	36.81	42.06
TraesCS7A01G346000.1	Wheat	cytosol	45.83	42.04
Bra038924.1-P	Field mustard	cytosol	41.67	41.67
TraesCS7D01G333200.1	Wheat	cytosol	45.14	41.4
TraesCS7B01G237200.1	Wheat	cytosol	45.14	41.4
Os01t0210600-02	Rice	cytosol, extracellular, plasma membrane, plastid	47.92	41.32
Bra027928.1-P	Field mustard	cytosol	41.67	38.71
Bra038157.1-P	Field mustard	cytosol	42.36	36.75
Bra019245.1-P	Field mustard	cytosol	39.58	36.31
Bra013765.1-P	Field mustard	cytosol	38.19	35.03
Os06t0538900-01	Rice	plastid	43.75	33.16
Bra030768.1-P	Field mustard	cytosol	38.89	33.14
Bra018568.1-P	Field mustard	cytosol	40.28	31.52
HORVU3Hr1G028780.1	Barley	plastid	49.31	28.74
Bra020626.1-P	Field mustard	cytosol	34.03	28.66
Bra010024.1-P	Field mustard	cytosol	33.33	28.07

Protein Annotations

EnsemblPlants:Bra017568.1	EnsemblPlants:Bra017568.1-P	EnsemblPlantsGene:Bra017568	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF7	PFAM:PF04398	SUPFAM:SSF141562	UniParc:UPI0002542535
UniProt:M4DM37	MapMan:35.2	:	:	:	:

Description

AT5G46230 (E=3e-066) | unknown protein

Coordinates

chrA09:+:16573575..16574009

Molecular Weight (calculated)

16339.5 Da

IEP (calculated)

9.116

GRAVY (calculated)

-0.528

Length

144 amino acids

Sequence
(BLAST)

001: MSSLETKPDQ RQGAEIFNGG STCKQKANEI LSTMNLPKGL LPLDNMTEIG HNKTTGYIWI KINKNVQHRF KAIGRNVSYD SEVTAFVENR RMRSLTGIKS
101: KELLLWVTIS EIFVNDQDQT KITFANPTGL SRTFPITAFE EEEK

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.