Factsheet for Bra019245.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10988	Canola	cytosol	99.36	99.36
AT4G24130.1	Thale cress	cytosol	91.72	91.72
Bra013765.1-P	Field mustard	cytosol	91.72	91.72
Solyc08g083090.1.1	Tomato	cytosol	70.06	71.43
PGSC0003DMT400031909	Potato	cytosol	67.52	68.39
VIT_02s0025g02540.t01	Wine grape	cytosol	66.88	67.74
KRH12720	Soybean	cytosol	68.15	66.88
GSMUA_Achr4P30400_001	Banana	cytosol	57.32	56.96
PGSC0003DMT400015025	Potato	cytosol	36.31	55.34
HORVU1Hr1G047930.1	Barley	plastid	55.41	53.05
TraesCS1A01G181100.1	Wheat	mitochondrion	54.78	52.44
TraesCS1D01G184600.1	Wheat	plastid	55.41	51.79
PGSC0003DMT400015026	Potato	cytosol	50.96	51.61
TraesCS1B01G199500.1	Wheat	cytosol	54.78	50.89
Zm00001d032443_P001	Maize	extracellular	53.5	45.65
EER91364	Sorghum	cytosol	54.14	44.27
Bra038924.1-P	Field mustard	cytosol	39.49	43.06
Bra025029.1-P	Field mustard	cytosol	38.85	42.36
Bra017568.1-P	Field mustard	cytosol	36.31	39.58
Bra027928.1-P	Field mustard	cytosol	38.85	39.35
Bra022026.1-P	Field mustard	cytosol	35.03	39.01
Bra010803.1-P	Field mustard	cytosol	24.2	38.78
Bra038157.1-P	Field mustard	cytosol	38.22	36.14
Bra030768.1-P	Field mustard	cytosol	37.58	34.91
Bra018568.1-P	Field mustard	cytosol	37.58	32.07
Bra010024.1-P	Field mustard	cytosol	33.12	30.41
Bra020626.1-P	Field mustard	cytosol	31.21	28.66

Protein Annotations

EnsemblPlants:Bra019245.1	EnsemblPlants:Bra019245.1-P	EnsemblPlantsGene:Bra019245	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF66	PFAM:PF04398	SEG:seg	SUPFAM:SSF141562
UniParc:UPI0002540F73	UniProt:M4DRV2	MapMan:35.2	:	:	:

Description

AT4G24130 (E=2e-073) | unknown protein

Coordinates

chrA03:+:25499875..25500439

Molecular Weight (calculated)

17909.8 Da

IEP (calculated)

6.533

GRAVY (calculated)

-0.368

Length

157 amino acids

Sequence
(BLAST)

001: MASEEVVVVG GERAGAEIVY GAEECYKNSG ELLEELGFPK GVMPLKNLVE CGRVRATGFV WMKQDTPYEH FFEATNTRVS YALEVTAYVD KGCMKKMTGV
101: KSKQMFMWVP IVEMSMEEPK SKKIYFKTPM GLGKSFHVTA FMDEEEKRNF YLENPKK

Best Arabidopsis Sequence Match ( AT4G24130.1 )
(BLAST)

001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN

Arabidopsis Description

T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.