Factsheet for Bra013765.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34258	Canola	cytosol	99.36	99.36
CDY03486	Canola	cytosol	98.09	98.09
Bra019245.1-P	Field mustard	cytosol	91.72	91.72
AT4G24130.1	Thale cress	cytosol	89.81	89.81
VIT_02s0025g02540.t01	Wine grape	cytosol	66.24	67.1
Solyc08g083090.1.1	Tomato	cytosol	65.61	66.88
KRH12720	Soybean	cytosol	65.61	64.38
PGSC0003DMT400031909	Potato	cytosol	63.06	63.87
GSMUA_Achr4P30400_001	Banana	cytosol	56.69	56.33
HORVU1Hr1G047930.1	Barley	plastid	52.87	50.61
PGSC0003DMT400015025	Potato	cytosol	33.12	50.49
PGSC0003DMT400015026	Potato	cytosol	49.68	50.32
TraesCS1A01G181100.1	Wheat	mitochondrion	52.23	50.0
TraesCS1D01G184600.1	Wheat	plastid	52.87	49.4
TraesCS1B01G199500.1	Wheat	cytosol	52.23	48.52
Zm00001d032443_P001	Maize	extracellular	50.96	43.48
EER91364	Sorghum	cytosol	51.59	42.19
Bra038924.1-P	Field mustard	cytosol	37.58	40.97
Bra025029.1-P	Field mustard	cytosol	37.58	40.97
Bra017568.1-P	Field mustard	cytosol	35.03	38.19
Bra022026.1-P	Field mustard	cytosol	33.76	37.59
Bra027928.1-P	Field mustard	cytosol	36.94	37.42
Bra038157.1-P	Field mustard	cytosol	36.31	34.34
Bra010803.1-P	Field mustard	cytosol	21.02	33.67
Bra030768.1-P	Field mustard	cytosol	35.67	33.14
Bra018568.1-P	Field mustard	cytosol	35.67	30.43
Bra010024.1-P	Field mustard	cytosol	30.57	28.07
Bra020626.1-P	Field mustard	cytosol	29.94	27.49

Protein Annotations

EnsemblPlants:Bra013765.1	EnsemblPlants:Bra013765.1-P	EnsemblPlantsGene:Bra013765	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF66	PFAM:PF04398	SEG:seg	SUPFAM:SSF141562
UniParc:UPI00025460B1	UniProt:M4DBA5	MapMan:35.2	:	:	:

Description

AT4G24130 (E=7e-077) | unknown protein

Coordinates

chrA01:+:7664985..7665703

Molecular Weight (calculated)

18045.0 Da

IEP (calculated)

7.914

GRAVY (calculated)

-0.414

Length

157 amino acids

Sequence
(BLAST)

001: MASEEVVVVE GERAGATIVY GAEECYKKSV ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQNTPYEH FFEGTNTRVS YGLEVTAYID KCCMKKMTGV
101: KSKQMFMWVP IAEMSMEEPK SKKIYFKTPM GIGKSYHVTA FMDEEEKRNF YLENPKK

Best Arabidopsis Sequence Match ( AT4G24130.1 )
(BLAST)

001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN

Arabidopsis Description

T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.