Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50651 | Soybean | cytosol | 76.13 | 75.16 |
| KRH02460 | Soybean | cytosol | 75.48 | 74.52 |
| PGSC0003DMT400031909 | Potato | cytosol | 73.55 | 73.55 |
| Solyc08g083090.1.1 | Tomato | cytosol | 70.97 | 71.43 |
| Bra019245.1-P | Field mustard | cytosol | 67.74 | 66.88 |
| CDX92616 | Canola | cytosol | 67.74 | 66.88 |
| CDY10988 | Canola | cytosol | 67.74 | 66.88 |
| Bra013765.1-P | Field mustard | cytosol | 67.1 | 66.24 |
| CDY34258 | Canola | cytosol | 67.1 | 66.24 |
| AT4G24130.1 | Thale cress | cytosol | 66.45 | 65.61 |
| CDY03486 | Canola | cytosol | 65.81 | 64.97 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 62.58 | 61.39 |
| PGSC0003DMT400015025 | Potato | cytosol | 37.42 | 56.31 |
| PGSC0003DMT400015026 | Potato | cytosol | 52.9 | 52.9 |
| HORVU1Hr1G047930.1 | Barley | plastid | 54.19 | 51.22 |
| TraesCS1A01G181100.1 | Wheat | mitochondrion | 54.19 | 51.22 |
| TraesCS1D01G184600.1 | Wheat | plastid | 54.19 | 50.0 |
| TraesCS1B01G199500.1 | Wheat | cytosol | 54.19 | 49.7 |
| Zm00001d032443_P001 | Maize | extracellular | 57.42 | 48.37 |
| EER91364 | Sorghum | cytosol | 58.06 | 46.88 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 44.52 | 46.31 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 45.16 | 42.17 |
| VIT_10s0003g01210.t01 | Wine grape | cytosol | 36.13 | 42.11 |
| VIT_12s0028g02230.t01 | Wine grape | cytosol | 36.77 | 41.91 |
Protein Annotations
| EntrezGene:100242761 | wikigene:100242761 | Gene3D:2.30.240.10 | MapMan:35.2 | InterPro:At5g01610-like | ProteinID:CBI34584 |
| ProteinID:CBI34584.3 | UniProt:D7TVQ9 | InterPro:DUF538 | EMBL:FN596251 | InterPro:IPR036758 | EntrezGene:LOC100242761 |
| wikigene:LOC100242761 | PFAM:PF04398 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF20 | SUPFAM:SSF141562 | UniParc:UPI00015CCA75 |
| ArrayExpress:VIT_02s0025g02540 | EnsemblPlantsGene:VIT_02s0025g02540 | EnsemblPlants:VIT_02s0025g02540.t01 | unigene:Vvi.19322 | RefSeq:XP_002280209 | RefSeq:XP_002280209.1 |
Description
No Description!
Coordinates
chr2:+:2205550..2206032
Molecular Weight (calculated)
17682.4 Da
IEP (calculated)
8.204
GRAVY (calculated)
-0.324
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTIRSQED QRAGAEIVYG SEACFNHSIS LLEELGFPKG VLPLQDLVEC GRVRETGFVW MKQKAPYEHF FTGTNTRVSY SMEVTAYVEK FKMKKMTGIK
101: SKQVFLWVPI TEMSIDDPAS QKIHFKTPVG IGKAFPLVAF MTEEEKQKYL EEARK
101: SKQVFLWVPI TEMSIDDPAS QKIHFKTPVG IGKAFPLVAF MTEEEKQKYL EEARK
001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
Arabidopsis Description
T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.