Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g01210.t01 | Wine grape | cytosol | 83.09 | 84.96 |
| KRH22290 | Soybean | cytosol | 83.82 | 83.82 |
| KRH27038 | Soybean | cytosol | 83.09 | 83.09 |
| EES01186 | Sorghum | cytosol | 78.68 | 78.68 |
| TraesCS3D01G236400.1 | Wheat | cytosol | 77.94 | 77.94 |
| TraesCS3B01G263900.1 | Wheat | cytosol | 77.94 | 77.94 |
| HORVU3Hr1G058820.1 | Barley | cytosol | 77.21 | 77.21 |
| Os01t0652700-00 | Rice | cytosol | 77.21 | 77.21 |
| TraesCS3A01G236000.1 | Wheat | cytosol | 77.21 | 77.21 |
| Zm00001d044034_P001 | Maize | cytosol | 76.47 | 76.47 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 75.0 | 74.45 |
| Os05t0573600-00 | Rice | cytosol | 74.26 | 73.19 |
| EES19980 | Sorghum | cytosol | 70.59 | 70.07 |
| Zm00001d039083_P001 | Maize | cytosol | 69.85 | 68.84 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 52.21 | 42.77 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 45.59 | 41.61 |
| VIT_02s0025g02540.t01 | Wine grape | cytosol | 41.91 | 36.77 |
Protein Annotations
| EntrezGene:100259133 | wikigene:100259133 | Gene3D:2.30.240.10 | MapMan:35.2 | EMBL:AM436359 | EMBL:AM484943 |
| InterPro:At5g01610-like | ProteinID:CAN62162 | ProteinID:CAN62162.1 | ProteinID:CAN62840 | ProteinID:CAN62840.1 | ProteinID:CBI21979 |
| ProteinID:CBI21979.3 | InterPro:DUF538 | UniProt:E0CTR3 | EMBL:FN595235 | InterPro:IPR036758 | EntrezGene:LOC100259133 |
| wikigene:LOC100259133 | PFAM:PF04398 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF21 | SUPFAM:SSF141562 | UniParc:UPI00015C9769 |
| ArrayExpress:VIT_12s0028g02230 | EnsemblPlantsGene:VIT_12s0028g02230 | EnsemblPlants:VIT_12s0028g02230.t01 | RefSeq:XP_002280454 | RefSeq:XP_002280454.1 | SEG:seg |
Description
No Description!
Coordinates
chr12:+:3014038..3014451
Molecular Weight (calculated)
15214.9 Da
IEP (calculated)
9.659
GRAVY (calculated)
-0.145
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKEGGIVK KGHEEGMRMA ASLLEEFELP LGLLPLGNVL EVGFVRSTGY MWIIQEKKVE HEFKMISKLV SYDTEIDGYI EKKKIKKLKG VKAKELMLWP
101: PVSQIKVDDP PTGKIHFKSL AGIVKTFPVE AFAAGQ
101: PVSQIKVDDP PTGKIHFKSL AGIVKTFPVE AFAAGQ
001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
Arabidopsis Description
T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.