CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044034_P001	Maize	cytosol	93.38	93.38
Os01t0652700-00	Rice	cytosol	88.97	88.97
TraesCS3D01G236400.1	Wheat	cytosol	88.24	88.24
TraesCS3B01G263900.1	Wheat	cytosol	88.24	88.24
TraesCS3A01G236000.1	Wheat	cytosol	88.24	88.24
HORVU3Hr1G058820.1	Barley	cytosol	87.5	87.5
PGSC0003DMT400026439	Potato	cytosol	80.88	80.88
KRH22290	Soybean	cytosol	80.15	80.15
Os05t0573600-00	Rice	cytosol	80.88	79.71
VIT_10s0003g01210.t01	Wine grape	cytosol	77.21	78.95
KRH27038	Soybean	cytosol	78.68	78.68
VIT_12s0028g02230.t01	Wine grape	cytosol	78.68	78.68
PGSC0003DMT400090071	Potato	cytosol	78.68	78.68
PGSC0003DMT400011191	Potato	cytosol	78.68	78.68
EES19980	Sorghum	cytosol	77.94	77.37
GSMUA_Achr2P20030_001	Banana	cytosol	75.74	75.18
Solyc03g006180.2.1	Tomato	cytosol	41.18	71.79
PGSC0003DMT400026444	Potato	cytosol	66.18	66.18
PGSC0003DMT400026442	Potato	cytosol	63.97	63.97
PGSC0003DMT400026443	Potato	cytosol	63.97	63.97
PGSC0003DMT400026441	Potato	cytosol	63.24	63.24
Solyc02g076890.1.1	Tomato	cytosol	62.5	62.5
KXG19797	Sorghum	cytosol	28.68	44.83
KXG19794	Sorghum	cytosol	46.32	44.06
KXG19795	Sorghum	cytosol	46.32	44.06
EER97870	Sorghum	cytosol	46.32	44.06
EER88241	Sorghum	cytosol	46.32	44.06
EES12041	Sorghum	cytosol	46.32	43.75
EER88235	Sorghum	cytosol	45.59	43.36
KXG19796	Sorghum	cytosol	44.85	42.66
EER88239	Sorghum	cytosol	44.85	42.66
EER96122	Sorghum	nucleus	44.85	42.66
EER88238	Sorghum	cytosol	41.91	41.61
EER96121	Sorghum	nucleus	43.38	41.26
EES08981	Sorghum	cytosol	50.74	41.07
EER95773	Sorghum	cytosol	43.38	40.97
EER97867	Sorghum	cytosol	42.65	40.85
OQU88323	Sorghum	cytosol	42.65	40.85
EER97866	Sorghum	cytosol	40.44	38.73
EES11575	Sorghum	cytosol	30.88	37.17
EER89876	Sorghum	cytosol	41.18	36.36
OQU88325	Sorghum	cytosol	39.71	33.75
EER97868	Sorghum	extracellular	25.74	33.65
EES00076	Sorghum	cytosol	41.18	32.75
EER95774	Sorghum	cytosol	33.82	32.17
EER91364	Sorghum	cytosol	37.5	26.56
EES16171	Sorghum	cytosol	44.85	24.9

Protein Annotations

EnsemblPlants:EES01186	EnsemblPlantsGene:SORBI_3003G240000	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF21	PFAM:PF04398	ProteinID:EES01186	ProteinID:EES01186.1	RefSeq:XP_002456066.1
SEG:seg	SUPFAM:SSF141562	UniParc:UPI0001A844EE	UniProt:C5XF88	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr3:+:57925385..57926723

Molecular Weight (calculated)

15011.7 Da

IEP (calculated)

10.154

GRAVY (calculated)

-0.007

Length

136 amino acids

Sequence
(BLAST)

001: MAEREGGVVK KGHEEGLKMA VSLLEEFGLP LGLLPLENVI EVGFVRATGY MWIAQRKKVE HQFKLVSKQV SYDVEITGLV SAKRIKKLKG VKAKELMLWP
101: PVNEIIVDDP PTGKIHFKSL AGVTKTFPVQ AFAAGQ

Best Arabidopsis Sequence Match ( AT4G24130.1 )
(BLAST)

001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN

Arabidopsis Description

T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.