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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
  • plastid 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400026442 Potato cytosol 99.26 99.26
PGSC0003DMT400026443 Potato cytosol 97.06 97.06
Solyc02g076890.1.1 Tomato cytosol 81.62 81.62
PGSC0003DMT400026439 Potato cytosol 72.79 72.79
VIT_10s0003g01210.t01 Wine grape cytosol 64.71 66.17
PGSC0003DMT400011191 Potato cytosol 64.71 64.71
PGSC0003DMT400090071 Potato cytosol 64.71 64.71
HORVU3Hr1G058820.1 Barley cytosol 63.97 63.97
TraesCS3D01G236400.1 Wheat cytosol 63.97 63.97
TraesCS3B01G263900.1 Wheat cytosol 63.97 63.97
EES01186 Sorghum cytosol 63.24 63.24
TraesCS3A01G236000.1 Wheat cytosol 63.24 63.24
Zm00001d044034_P001 Maize cytosol 62.5 62.5
PGSC0003DMT400026444 Potato cytosol 61.76 61.76
Os01t0652700-00 Rice cytosol 61.76 61.76
Os05t0573600-00 Rice cytosol 58.09 57.25
GSMUA_Achr2P20030_001 Banana cytosol 56.62 56.2
EES19980 Sorghum cytosol 56.62 56.2
Zm00001d039083_P001 Maize cytosol 53.68 52.9
PGSC0003DMT400031909 Potato cytosol 34.56 30.32
PGSC0003DMT400024987 Potato cytosol 30.88 30.0
PGSC0003DMT400007217 Potato cytosol 36.03 29.34
PGSC0003DMT400015025 Potato cytosol 21.32 28.16
PGSC0003DMT400054524 Potato cytosol 30.15 28.08
PGSC0003DMT400007216 Potato cytosol 35.29 27.43
PGSC0003DMT400015026 Potato cytosol 26.47 23.23
Protein Annotations
EnsemblPlants:PGSC0003DMT400026441EnsemblPlantsGene:PGSC0003DMG400010202Gene3D:2.30.240.10InterPro:At5g01610-likeInterPro:DUF538InterPro:IPR036758
PANTHER:PTHR31676PANTHER:PTHR31676:SF21PFAM:PF04398PGSC:PGSC0003DMG400010202SEG:segSUPFAM:SSF141562
UniParc:UPI00029639EAUniProt:M1AN59MapMan:35.2:::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400010202]
Coordinates
chr2:+:32231987..32232759
Molecular Weight (calculated)
15237.9 Da
IEP (calculated)
9.815
GRAVY (calculated)
-0.153
Length
136 amino acids
Sequence
(BLAST)
001: MAEKEGAIVK KGHEEGFKMM ISLLEEFKLP LGIFPVVDVI EVGFVKNTGY MWIQQAKKVE HKFKMLRTPA SYDTEISGYI DKKRIKKLKG LKVNGPIVSH
101: PVNEIIVDDP PTGNIQFKGF GGISKTLPLE YFVAGQ
Best Arabidopsis Sequence Match ( AT4G24130.1 )
(BLAST)
001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
Arabidopsis Description
T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.