Factsheet for PGSC0003DMT400024987

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g016580.1.1	Tomato	cytosol, extracellular	92.86	92.86
PGSC0003DMT400054524	Potato	cytosol	70.0	67.12
VIT_10s0003g03300.t01	Wine grape	cytosol	63.57	59.73
Bra022026.1-P	Field mustard	cytosol	60.0	59.57
CDY43960	Canola	cytosol	60.0	59.57
CDX87732	Canola	cytosol	57.86	56.64
AT5G46230.1	Thale cress	cytosol	56.43	55.24
CDY33463	Canola	cytosol	56.43	54.86
CDY35153	Canola	cytosol	56.43	54.86
Bra025029.1-P	Field mustard	cytosol	56.43	54.86
CDY62357	Canola	cytosol	56.43	54.86
Bra017568.1-P	Field mustard	cytosol	55.71	54.17
TraesCS3B01G586700.1	Wheat	cytosol	55.0	51.33
TraesCS3B01G594700.1	Wheat	cytosol	55.0	51.33
CDX90222	Canola	cytosol	35.71	51.02
Bra010803.1-P	Field mustard	cytosol	35.71	51.02
TraesCS3B01G554700.1	Wheat	cytosol	54.29	51.01
TraesCS3A01G132500.1	Wheat	cytosol	54.29	51.01
GSMUA_Achr7P13960_001	Banana	cytosol	57.14	50.96
TraesCS3B01G579600.1	Wheat	cytosol	54.29	50.67
TraesCS3B01G605800.1	Wheat	cytosol	55.0	50.66
TraesCS3D01G148700.1	Wheat	cytosol	53.57	50.34
TraesCSU01G243200.1	Wheat	cytosol	53.57	50.0
TraesCSU01G231600.1	Wheat	cytosol	45.0	50.0
TraesCS3B01G554600.1	Wheat	cytosol	53.57	50.0
GSMUA_Achr10P...	Banana	cytosol	54.29	50.0
TraesCS3B01G586600.1	Wheat	cytosol	41.43	49.15
TraesCS3A01G132600.1	Wheat	cytosol	55.71	49.06
TraesCS3D01G148900.1	Wheat	cytosol	55.71	49.06
TraesCS3B01G053600.1	Wheat	cytosol	50.71	48.97
GSMUA_Achr10P...	Banana	cytosol	54.29	48.72
TraesCS3B01G606500.1	Wheat	cytosol	53.57	48.7
TraesCS3B01G167000.1	Wheat	cytosol	55.0	48.43
CDY35265	Canola	cytosol	46.43	46.43
KRH11189	Soybean	cytosol	52.86	45.68
PGSC0003DMT400090071	Potato	cytosol	44.29	45.59
PGSC0003DMT400011191	Potato	cytosol	44.29	45.59
EER89876	Sorghum	cytosol	50.0	45.45
CDY03234	Canola	plastid	57.14	45.45
TraesCS7A01G346000.1	Wheat	cytosol	50.0	44.59
EES00076	Sorghum	cytosol	54.29	44.44
TraesCS7B01G237200.1	Wheat	cytosol	49.29	43.95
TraesCS7D01G333200.1	Wheat	cytosol	49.29	43.95
Zm00001d037018_P001	Maize	cytosol, extracellular, mitochondrion, plastid	50.0	43.48
Os01t0210600-02	Rice	cytosol, extracellular, plasma membrane, plastid	51.43	43.11
PGSC0003DMT400031909	Potato	cytosol	46.43	41.94
PGSC0003DMT400007217	Potato	cytosol	50.0	41.92
PGSC0003DMT400026439	Potato	cytosol	39.29	40.44
PGSC0003DMT400007216	Potato	cytosol	50.0	40.0
Zm00001d008910_P001	Maize	cytosol	35.71	39.68
PGSC0003DMT400026444	Potato	cytosol	37.86	38.97
PGSC0003DMT400015025	Potato	cytosol	26.43	35.92
Os06t0538900-01	Rice	plastid	47.86	35.26
AT1G30020.1	Thale cress	cytosol	39.29	35.03
PGSC0003DMT400015026	Potato	cytosol	38.57	34.84
HORVU3Hr1G028780.1	Barley	plastid	55.71	31.58
PGSC0003DMT400026443	Potato	cytosol	30.0	30.88
PGSC0003DMT400026442	Potato	cytosol	30.0	30.88
PGSC0003DMT400026441	Potato	cytosol	30.0	30.88

Protein Annotations

EnsemblPlants:PGSC0003DMT400024987	EnsemblPlantsGene:PGSC0003DMG400009652	EntrezGene:107062484	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF7	PFAM:PF04398	PGSC:PGSC0003DMG400009652	RefSeq:XP_015168638.1
SEG:seg	SUPFAM:SSF141562	UniParc:UPI000295280C	UniProt:M1AKV5	MapMan:35.2	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400009652]

Coordinates

chr8:-:10277629..10278236

Molecular Weight (calculated)

16062.5 Da

IEP (calculated)

9.570

GRAVY (calculated)

-0.421

Length

140 amino acids

Sequence
(BLAST)

001: MSSQLSENHR ENAEIFTDPT ICKQKSLQLL EQINMPKGLL PLDDLIEIGH NKQTGFVWLK QKKAKENRFK KIGKLVWYNT EVTGFLEDRR MKKLTGVKSK
101: ELLIWITISD ISIHDSDLQK ITFATPSGIS KAFPVSAFEE

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.