Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015025 | Potato | cytosol | 50.32 | 75.73 |
| PGSC0003DMT400031909 | Potato | cytosol | 62.58 | 62.58 |
| VIT_02s0025g02540.t01 | Wine grape | cytosol | 52.9 | 52.9 |
| KRH50651 | Soybean | cytosol | 53.55 | 52.87 |
| KRH02460 | Soybean | cytosol | 53.55 | 52.87 |
| GSMUA_Achr4P30400_001 | Banana | cytosol | 52.9 | 51.9 |
| CDX92616 | Canola | cytosol | 52.26 | 51.59 |
| CDY10988 | Canola | cytosol | 52.26 | 51.59 |
| Bra019245.1-P | Field mustard | cytosol | 51.61 | 50.96 |
| AT4G24130.1 | Thale cress | cytosol | 50.97 | 50.32 |
| Bra013765.1-P | Field mustard | cytosol | 50.32 | 49.68 |
| CDY34258 | Canola | cytosol | 50.32 | 49.68 |
| CDY03486 | Canola | cytosol | 49.03 | 48.41 |
| HORVU1Hr1G047930.1 | Barley | plastid | 42.58 | 40.24 |
| TraesCS1A01G181100.1 | Wheat | mitochondrion | 42.58 | 40.24 |
| TraesCS1D01G184600.1 | Wheat | plastid | 43.23 | 39.88 |
| Zm00001d032443_P001 | Maize | extracellular | 47.1 | 39.67 |
| TraesCS1B01G199500.1 | Wheat | cytosol | 43.23 | 39.65 |
| PGSC0003DMT400024987 | Potato | cytosol | 34.84 | 38.57 |
| EER91364 | Sorghum | cytosol | 45.81 | 36.98 |
| PGSC0003DMT400011191 | Potato | cytosol | 32.26 | 36.76 |
| PGSC0003DMT400026439 | Potato | cytosol | 32.26 | 36.76 |
| PGSC0003DMT400090071 | Potato | cytosol | 32.26 | 36.76 |
| PGSC0003DMT400054524 | Potato | cytosol | 34.19 | 36.3 |
| PGSC0003DMT400026444 | Potato | cytosol | 29.68 | 33.82 |
| PGSC0003DMT400007217 | Potato | cytosol | 35.48 | 32.93 |
| PGSC0003DMT400007216 | Potato | cytosol | 36.13 | 32.0 |
| PGSC0003DMT400026443 | Potato | cytosol | 23.87 | 27.21 |
| PGSC0003DMT400026442 | Potato | cytosol | 23.23 | 26.47 |
| PGSC0003DMT400026441 | Potato | cytosol | 23.23 | 26.47 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400015026 | EnsemblPlantsGene:PGSC0003DMG400005865 | EntrezGene:102600935 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF20 | PFAM:PF04398 | PGSC:PGSC0003DMG400005865 | RefSeq:XP_006352295.1 |
| SUPFAM:SSF141562 | UniParc:UPI000296219D | UniProt:M1A5A6 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400005865]
Coordinates
chr8:-:5626653..5627214
Molecular Weight (calculated)
17672.6 Da
IEP (calculated)
8.591
GRAVY (calculated)
-0.219
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDLQKSIH EDERAGAEIA YGAEDCYSLI VKVSQDSGFP KGMLPLKYLE EFGYVSKTGF IWMKQKAPYQ HYFSSIKMLV SYAKMITAYV ERGKMKKISG
101: VKSKQLLLWV PTIEMSINED QKKIYFKTLM GIGMSYPIIV FMTDEEKEEA KCSSA
101: VKSKQLLLWV PTIEMSINED QKKIYFKTLM GIGMSYPIIV FMTDEEKEEA KCSSA
001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
Arabidopsis Description
T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.