Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400090071 | Potato | cytosol | 100.0 | 100.0 |
| PGSC0003DMT400026439 | Potato | cytosol | 83.82 | 83.82 |
| VIT_10s0003g01210.t01 | Wine grape | cytosol | 79.41 | 81.2 |
| HORVU3Hr1G058820.1 | Barley | cytosol | 80.15 | 80.15 |
| TraesCS3D01G236400.1 | Wheat | cytosol | 80.15 | 80.15 |
| TraesCS3B01G263900.1 | Wheat | cytosol | 80.15 | 80.15 |
| TraesCS3A01G236000.1 | Wheat | cytosol | 79.41 | 79.41 |
| EES01186 | Sorghum | cytosol | 78.68 | 78.68 |
| Zm00001d044034_P001 | Maize | cytosol | 78.68 | 78.68 |
| Os01t0652700-00 | Rice | cytosol | 77.94 | 77.94 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 75.74 | 75.18 |
| Os05t0573600-00 | Rice | cytosol | 73.53 | 72.46 |
| PGSC0003DMT400026444 | Potato | cytosol | 71.32 | 71.32 |
| EES19980 | Sorghum | cytosol | 69.85 | 69.34 |
| Zm00001d039083_P001 | Maize | cytosol | 69.12 | 68.12 |
| PGSC0003DMT400026443 | Potato | cytosol | 65.44 | 65.44 |
| PGSC0003DMT400026442 | Potato | cytosol | 65.44 | 65.44 |
| PGSC0003DMT400026441 | Potato | cytosol | 64.71 | 64.71 |
| PGSC0003DMT400024987 | Potato | cytosol | 45.59 | 44.29 |
| PGSC0003DMT400007217 | Potato | cytosol | 47.06 | 38.32 |
| PGSC0003DMT400031909 | Potato | cytosol | 43.38 | 38.06 |
| PGSC0003DMT400054524 | Potato | cytosol | 40.44 | 37.67 |
| PGSC0003DMT400007216 | Potato | cytosol | 44.12 | 34.29 |
| PGSC0003DMT400015025 | Potato | cytosol | 25.74 | 33.98 |
| PGSC0003DMT400015026 | Potato | cytosol | 36.76 | 32.26 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011191 | EnsemblPlantsGene:PGSC0003DMG402004382 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF21 | PFAM:PF04398 | PGSC:PGSC0003DMG402004382 | SUPFAM:SSF141562 | UniParc:UPI000296256F |
| UniProt:M0ZZ64 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402004382]
Coordinates
chr3:+:1574317..1576934
Molecular Weight (calculated)
15034.6 Da
IEP (calculated)
9.601
GRAVY (calculated)
-0.087
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKEGAIVK KGHEEGLKMA LSLLEEYQLP AGLLPLADVI EVGFVKTTGY MWILQTKKVE HNFKMISKLV SYGAEITGYV EKKRIKKLKG VKAKELMLWP
101: PVGDISVDDS PTGKIHFKSL AGITKTFPVE AFAAGQ
101: PVGDISVDDS PTGKIHFKSL AGITKTFPVE AFAAGQ
001: MALREMIIDE SDDIESYSDQ SLCLDKAKEL LALIKLPTGL LPLKDMTEVG YNKTKGFVWM RMRSKIEHTF REIGRRVLYD TEITAFVEDR RMRRLTGVKS
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
Arabidopsis Description
Uncharacterized protein T1P2.11 [Source:UniProtKB/TrEMBL;Acc:Q9C8R7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.