CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039083_P001	Maize	cytosol	91.97	91.3
EES01186	Sorghum	cytosol	77.37	77.94
PGSC0003DMT400026439	Potato	cytosol	72.99	73.53
VIT_10s0003g01210.t01	Wine grape	cytosol	69.34	71.43
KRH27038	Soybean	cytosol	70.8	71.32
KRH22290	Soybean	cytosol	70.8	71.32
VIT_12s0028g02230.t01	Wine grape	cytosol	70.07	70.59
PGSC0003DMT400090071	Potato	cytosol	69.34	69.85
PGSC0003DMT400011191	Potato	cytosol	69.34	69.85
GSMUA_Achr2P20030_001	Banana	cytosol	66.42	66.42
PGSC0003DMT400026444	Potato	cytosol	64.23	64.71
Solyc03g006180.2.1	Tomato	cytosol	35.77	62.82
Solyc02g076890.1.1	Tomato	cytosol	58.39	58.82
PGSC0003DMT400026442	Potato	cytosol	56.93	57.35
PGSC0003DMT400026443	Potato	cytosol	56.93	57.35
PGSC0003DMT400026441	Potato	cytosol	56.2	56.62
KXG19797	Sorghum	cytosol	27.01	42.53
EES12041	Sorghum	cytosol	44.53	42.36
EER88241	Sorghum	cytosol	43.8	41.96
EER97870	Sorghum	cytosol	43.8	41.96
KXG19794	Sorghum	cytosol	43.8	41.96
KXG19795	Sorghum	cytosol	43.8	41.96
EER95773	Sorghum	cytosol	43.8	41.67
OQU88323	Sorghum	cytosol	43.07	41.55
EER97867	Sorghum	cytosol	43.07	41.55
KXG19796	Sorghum	cytosol	43.07	41.26
EER88239	Sorghum	cytosol	43.07	41.26
EER88235	Sorghum	cytosol	43.07	41.26
EER96122	Sorghum	nucleus	43.07	41.26
EER96121	Sorghum	nucleus	42.34	40.56
EES08981	Sorghum	cytosol	49.63	40.48
EER88238	Sorghum	cytosol	40.15	40.15
EER97866	Sorghum	cytosol	40.88	39.44
EER89876	Sorghum	cytosol	40.15	35.71
EER97868	Sorghum	extracellular	27.01	35.58
EES11575	Sorghum	cytosol	29.2	35.4
OQU88325	Sorghum	cytosol	40.15	34.38
EES00076	Sorghum	cytosol	41.61	33.33
EER95774	Sorghum	cytosol	29.2	27.97
EER91364	Sorghum	cytosol	36.5	26.04
EES16171	Sorghum	cytosol	43.07	24.08

Protein Annotations

EnsemblPlants:EES19980	EnsemblPlantsGene:SORBI_3009G239800	EntrezGene:8064704	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF21	PFAM:PF04398	ProteinID:EES19980	ProteinID:EES19980.1
RefSeq:XP_002441550.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI0001A8933B	UniProt:C5YW12	MapMan:35.2

Description

hypothetical protein

Coordinates

chr9:-:57755352..57756129

Molecular Weight (calculated)

14975.2 Da

IEP (calculated)

7.837

GRAVY (calculated)

-0.182

Length

137 amino acids

Sequence
(BLAST)

001: MAAEKEGAVV TKGHDEGTKA AAALLEEFGL PLGLLPLEDV TEVGFVRDTG YFWLAQRKKV EHRFHKIGKQ VSYDVEIAGY VQPRGIKKLK GVKAKELMLW
101: PPINEMAVDD PPTGNIHFKS LAGVTKTFPV DAFAAGQ

Best Arabidopsis Sequence Match ( AT4G24130.1 )
(BLAST)

001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN

Arabidopsis Description

T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.