CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19795	Sorghum	cytosol	98.6	98.6
KXG19794	Sorghum	cytosol	98.6	98.6
KXG19797	Sorghum	cytosol	57.34	94.25
EER88241	Sorghum	cytosol	92.31	92.31
Zm00001d018682_P001	Maize	cytosol	88.81	88.81
EER88239	Sorghum	cytosol	88.11	88.11
EER97870	Sorghum	cytosol	88.11	88.11
EER88238	Sorghum	cytosol	83.92	87.59
Zm00001d018683_P001	Maize	cytosol	87.41	87.41
KXG19796	Sorghum	cytosol	87.41	87.41
Os07t0119800-00	Rice	cytosol	84.62	84.62
Os07t0120300-00	Rice	cytosol	83.92	84.51
EES12041	Sorghum	cytosol	84.62	84.03
Os07t0120500-00	Rice	cytosol	83.22	83.8
Os07t0120100-01	Rice	cytosol	83.22	83.8
EER95773	Sorghum	cytosol	83.92	83.33
EER96122	Sorghum	nucleus	83.22	83.22
Os07t0120650-01	Rice	cytosol	82.52	83.1
EES11575	Sorghum	cytosol	65.03	82.3
EER96121	Sorghum	nucleus	81.82	81.82
Os07t0118200-00	Rice	cytosol	80.42	80.99
TraesCS5A01G517300.1	Wheat	cytosol	78.32	77.78
Os07t0120000-00	Rice	cytosol	76.22	76.76
Os07t0118250-00	Rice	cytosol	76.22	76.76
TraesCS4D01G343700.1	Wheat	cytosol	76.92	76.39
EER97867	Sorghum	cytosol	74.83	75.35
HORVU4Hr1G085120.1	Barley	cytosol	76.22	75.17
OQU88323	Sorghum	cytosol	74.13	74.65
TraesCS5A01G517400.1	Wheat	cytosol	74.83	74.31
TraesCS5A01G517600.1	Wheat	cytosol	74.83	73.79
TraesCS4B01G349000.1	Wheat	cytosol	74.83	73.29
GSMUA_Achr9P04160_001	Banana	cytosol	70.63	70.63
EER97866	Sorghum	cytosol	67.13	67.61
GSMUA_AchrUn_...	Banana	cytosol	53.15	66.67
GSMUA_AchrUn_...	Banana	cytosol	53.15	66.67
EER95774	Sorghum	cytosol	65.73	65.73
GSMUA_AchrUn_...	Banana	cytosol	51.75	64.91
OQU88325	Sorghum	cytosol	65.03	58.12
EER97868	Sorghum	extracellular	37.76	51.92
EES01186	Sorghum	cytosol	43.36	45.59
EES00076	Sorghum	cytosol	53.15	44.44
EES19980	Sorghum	cytosol	41.26	43.07
EER89876	Sorghum	cytosol	46.15	42.86
EES08981	Sorghum	cytosol	41.26	35.12
EER91364	Sorghum	cytosol	43.36	32.29
EES16171	Sorghum	cytosol	44.76	26.12

Protein Annotations

EnsemblPlants:EER88235	EnsemblPlantsGene:SORBI_3010G117100	EntrezGene:8076396	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF26	PFAM:PF04398	ProteinID:EER88235	ProteinID:EER88235.1
RefSeq:XP_002436868.1	SEG:seg	SUPFAM:SSF141562	unigene:Sbi.19888	UniParc:UPI0001A8959F	UniProt:C5Z8L2
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:12839014..12839713

Molecular Weight (calculated)

15893.3 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.188

Length

143 amino acids

Sequence
(BLAST)

001: MASQDIKSHR AGAEIITGDA ACRKKSVELL EELGLPKGLF PMEDIKEFGY NRETGFMWLI QGKKKVEHTF KKIKQTVSYA TEVTAFVETG KLRKITGVKT
101: KELMLWLSVV EVYVPEASLD KVTFKTGTGL SDTFDAPAFA LGE

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.