CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97870	Sorghum	cytosol	89.58	90.21
KXG19797	Sorghum	cytosol	54.17	89.66
Zm00001d018682_P001	Maize	cytosol	88.89	89.51
Zm00001d018683_P001	Maize	cytosol	87.5	88.11
EER88239	Sorghum	cytosol	86.81	87.41
EER88238	Sorghum	cytosol	82.64	86.86
KXG19796	Sorghum	cytosol	86.11	86.71
EES12041	Sorghum	cytosol	85.42	85.42
EER88241	Sorghum	cytosol	84.72	85.31
KXG19795	Sorghum	cytosol	84.72	85.31
KXG19794	Sorghum	cytosol	84.72	85.31
EER96121	Sorghum	nucleus	84.03	84.62
EER96122	Sorghum	nucleus	84.03	84.62
EER88235	Sorghum	cytosol	83.33	83.92
Os07t0120300-00	Rice	cytosol	82.64	83.8
Os07t0120500-00	Rice	cytosol	81.94	83.1
Os07t0119800-00	Rice	cytosol	81.94	82.52
Os07t0118200-00	Rice	cytosol	79.86	80.99
Os07t0120650-01	Rice	cytosol	79.17	80.28
Os07t0120100-01	Rice	cytosol	79.17	80.28
EES11575	Sorghum	cytosol	62.5	79.65
TraesCS5A01G517300.1	Wheat	cytosol	76.39	76.39
OQU88323	Sorghum	cytosol	75.0	76.06
EER97867	Sorghum	cytosol	73.61	74.65
Os07t0120000-00	Rice	cytosol	73.61	74.65
Os07t0118250-00	Rice	cytosol	73.61	74.65
TraesCS4D01G343700.1	Wheat	cytosol	74.31	74.31
HORVU4Hr1G085120.1	Barley	cytosol	73.61	73.1
TraesCS5A01G517600.1	Wheat	cytosol	73.61	73.1
TraesCS5A01G517400.1	Wheat	cytosol	72.92	72.92
TraesCS4B01G349000.1	Wheat	cytosol	71.53	70.55
GSMUA_Achr9P04160_001	Banana	cytosol	69.44	69.93
EER97866	Sorghum	cytosol	68.06	69.01
EER95774	Sorghum	cytosol	63.89	64.34
GSMUA_AchrUn_...	Banana	cytosol	50.0	63.16
GSMUA_AchrUn_...	Banana	cytosol	50.0	63.16
GSMUA_AchrUn_...	Banana	cytosol	48.61	61.4
OQU88325	Sorghum	cytosol	64.58	58.12
EER97868	Sorghum	extracellular	38.19	52.88
EES00076	Sorghum	cytosol	52.08	43.86
EES19980	Sorghum	cytosol	41.67	43.8
EER89876	Sorghum	cytosol	46.53	43.51
EES01186	Sorghum	cytosol	40.97	43.38
EES08981	Sorghum	cytosol	37.5	32.14
EER91364	Sorghum	cytosol	38.19	28.65
EES16171	Sorghum	cytosol	43.75	25.71

Protein Annotations

EnsemblPlants:EER95773	EnsemblPlantsGene:SORBI_3002G012700	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF26	PFAM:PF04398	ProteinID:EER95773	ProteinID:EER95773.1	RefSeq:XP_002459252.1
SEG:seg	SUPFAM:SSF141562	unigene:Sbi.19903	UniParc:UPI0001A82D4B	UniProt:C5X7X2	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:+:1159090..1163402

Molecular Weight (calculated)

15820.2 Da

IEP (calculated)

7.512

GRAVY (calculated)

-0.149

Length

144 amino acids

Sequence
(BLAST)

001: MASSQAIESH RAGAAVVTGD AACRNKSVEM LEELGLPKGL LPMEDIQEFG YNRDTGFMWL LQRKKKVEHT FKKIKQTVSY ATEVTAFVDK GKLSKITGVK
101: TKELMLWLSV VEVYVPEALP EKVTFKTGTG LSDSFDGAAF ALGE

Best Arabidopsis Sequence Match ( AT1G09310.1 )
(BLAST)

001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.