CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96121	Sorghum	nucleus	95.8	95.8
KXG19797	Sorghum	cytosol	55.24	90.8
EER97870	Sorghum	cytosol	87.41	87.41
EER88238	Sorghum	cytosol	82.52	86.13
KXG19796	Sorghum	cytosol	86.01	86.01
EER88241	Sorghum	cytosol	86.01	86.01
EER88239	Sorghum	cytosol	86.01	86.01
KXG19795	Sorghum	cytosol	84.62	84.62
KXG19794	Sorghum	cytosol	84.62	84.62
Os07t0120300-00	Rice	cytosol	83.92	84.51
EES12041	Sorghum	cytosol	84.62	84.03
EER95773	Sorghum	cytosol	84.62	84.03
Os07t0120500-00	Rice	cytosol	83.22	83.8
EER88235	Sorghum	cytosol	83.22	83.22
EES11575	Sorghum	cytosol	65.73	83.19
Os07t0120100-01	Rice	cytosol	82.52	83.1
Os07t0118200-00	Rice	cytosol	82.52	83.1
Os07t0119800-00	Rice	cytosol	82.52	82.52
Os07t0120650-01	Rice	cytosol	81.82	82.39
TraesCS5A01G517300.1	Wheat	cytosol	81.82	81.25
TraesCS4D01G343700.1	Wheat	cytosol	79.02	78.47
TraesCS5A01G517400.1	Wheat	cytosol	77.62	77.08
TraesCS5A01G517600.1	Wheat	cytosol	77.62	76.55
HORVU4Hr1G085120.1	Barley	cytosol	77.62	76.55
Os07t0120000-00	Rice	cytosol	75.52	76.06
Os07t0118250-00	Rice	cytosol	75.52	76.06
TraesCS4B01G349000.1	Wheat	cytosol	76.92	75.34
OQU88323	Sorghum	cytosol	71.33	71.83
EER97867	Sorghum	cytosol	71.33	71.83
GSMUA_Achr9P04160_001	Banana	cytosol	70.63	70.63
EER97866	Sorghum	cytosol	67.13	67.61
EER95774	Sorghum	cytosol	67.13	67.13
GSMUA_AchrUn_...	Banana	cytosol	51.75	64.91
GSMUA_AchrUn_...	Banana	cytosol	51.75	64.91
GSMUA_AchrUn_...	Banana	cytosol	50.35	63.16
OQU88325	Sorghum	cytosol	65.03	58.12
EER97868	Sorghum	extracellular	38.46	52.88
EES01186	Sorghum	cytosol	42.66	44.85
EER89876	Sorghum	cytosol	47.55	44.16
EES00076	Sorghum	cytosol	52.45	43.86
EES19980	Sorghum	cytosol	41.26	43.07
EES08981	Sorghum	cytosol	39.86	33.93
EER91364	Sorghum	cytosol	38.46	28.65
EES16171	Sorghum	cytosol	41.26	24.08

Protein Annotations

EnsemblPlants:EER96122	EnsemblPlantsGene:SORBI_3002G089100	EntrezGene:8069153	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF26	PFAM:PF04398	ProteinID:EER96122	ProteinID:EER96122.1
RefSeq:XP_002459601.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI0001A83A2A	UniProt:C5X203	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:+:9366836..9367575

Molecular Weight (calculated)

15937.3 Da

IEP (calculated)

8.453

GRAVY (calculated)

-0.252

Length

143 amino acids

Sequence
(BLAST)

001: MASQIESHRS GAEVVSGDDA MCRKKSVELL EELSLPKGLL PMEDLQEFGY NRATGFMWLV QRKKKVEHTF KKIKQTVSYA SEVTAFVEKG KLRKITGVKT
101: KELMLWLSVV EVYVPETSPE NVTFKTGTGL SDSFNAAAFA LGE

Best Arabidopsis Sequence Match ( AT1G30020.1 )
(BLAST)

001: MALREMIIDE SDDIESYSDQ SLCLDKAKEL LALIKLPTGL LPLKDMTEVG YNKTKGFVWM RMRSKIEHTF REIGRRVLYD TEITAFVEDR RMRRLTGVKS
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM

Arabidopsis Description

Uncharacterized protein T1P2.11 [Source:UniProtKB/TrEMBL;Acc:Q9C8R7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.