CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96122	Sorghum	nucleus	95.8	95.8
KXG19797	Sorghum	cytosol	55.94	91.95
EER88241	Sorghum	cytosol	87.41	87.41
EER88238	Sorghum	cytosol	83.22	86.86
EER97870	Sorghum	cytosol	86.71	86.71
EER88239	Sorghum	cytosol	86.01	86.01
KXG19796	Sorghum	cytosol	86.01	86.01
EES11575	Sorghum	cytosol	67.13	84.96
EES12041	Sorghum	cytosol	85.31	84.72
EER95773	Sorghum	cytosol	84.62	84.03
Os07t0120300-00	Rice	cytosol	83.22	83.8
KXG19794	Sorghum	cytosol	83.22	83.22
KXG19795	Sorghum	cytosol	83.22	83.22
Os07t0120500-00	Rice	cytosol	82.52	83.1
Os07t0120100-01	Rice	cytosol	82.52	83.1
Os07t0118200-00	Rice	cytosol	81.82	82.39
Os07t0119800-00	Rice	cytosol	81.82	81.82
EER88235	Sorghum	cytosol	81.82	81.82
Os07t0120650-01	Rice	cytosol	81.12	81.69
TraesCS5A01G517300.1	Wheat	cytosol	81.12	80.56
TraesCS4D01G343700.1	Wheat	cytosol	78.32	77.78
TraesCS5A01G517400.1	Wheat	cytosol	76.92	76.39
TraesCS5A01G517600.1	Wheat	cytosol	76.92	75.86
Os07t0118250-00	Rice	cytosol	74.83	75.35
Os07t0120000-00	Rice	cytosol	74.83	75.35
HORVU4Hr1G085120.1	Barley	cytosol	76.22	75.17
TraesCS4B01G349000.1	Wheat	cytosol	76.22	74.66
OQU88323	Sorghum	cytosol	71.33	71.83
EER97867	Sorghum	cytosol	71.33	71.83
GSMUA_Achr9P04160_001	Banana	cytosol	69.23	69.23
EER95774	Sorghum	cytosol	67.83	67.83
EER97866	Sorghum	cytosol	67.13	67.61
GSMUA_AchrUn_...	Banana	cytosol	51.75	64.91
GSMUA_AchrUn_...	Banana	cytosol	51.05	64.04
GSMUA_AchrUn_...	Banana	cytosol	51.05	64.04
OQU88325	Sorghum	cytosol	65.03	58.12
EER97868	Sorghum	extracellular	39.16	53.85
EER89876	Sorghum	cytosol	46.85	43.51
EES01186	Sorghum	cytosol	41.26	43.38
EES00076	Sorghum	cytosol	51.05	42.69
EES19980	Sorghum	cytosol	40.56	42.34
EES08981	Sorghum	cytosol	40.56	34.52
EER91364	Sorghum	cytosol	37.76	28.12
EES16171	Sorghum	cytosol	41.96	24.49

Protein Annotations

EnsemblPlants:EER96121	EnsemblPlantsGene:SORBI_3002G088900	EntrezGene:8081800	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF26	PFAM:PF04398	ProteinID:EER96121	ProteinID:EER96121.1
RefSeq:XP_002459600.1	SEG:seg	SUPFAM:SSF141562	unigene:Sbi.19963	UniParc:UPI0001A83A29	UniProt:C5X202
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:9358035..9358789

Molecular Weight (calculated)

15893.3 Da

IEP (calculated)

8.453

GRAVY (calculated)

-0.233

Length

143 amino acids

Sequence
(BLAST)

001: MASQIESHRS GAEVVSGDDA MCRKKSMELL EELGLPKGLL PMEDLQEFGY NRASGFMWLV QRKKKVEHTF KKIKQTVSYA SEVTAFAEKG KLRKITGVKT
101: KELMLWLSVV EVYVPEALPE NVTFKTGTGL SDSFNAAAFA LGE

Best Arabidopsis Sequence Match ( AT1G30020.1 )
(BLAST)

001: MALREMIIDE SDDIESYSDQ SLCLDKAKEL LALIKLPTGL LPLKDMTEVG YNKTKGFVWM RMRSKIEHTF REIGRRVLYD TEITAFVEDR RMRRLTGVKS
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM

Arabidopsis Description

Uncharacterized protein T1P2.11 [Source:UniProtKB/TrEMBL;Acc:Q9C8R7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.