Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- nucleus 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g01210.t01 | Wine grape | cytosol | 82.35 | 84.21 |
| PGSC0003DMT400011191 | Potato | cytosol | 83.82 | 83.82 |
| PGSC0003DMT400090071 | Potato | cytosol | 83.82 | 83.82 |
| HORVU3Hr1G058820.1 | Barley | cytosol | 83.09 | 83.09 |
| TraesCS3D01G236400.1 | Wheat | cytosol | 83.09 | 83.09 |
| TraesCS3B01G263900.1 | Wheat | cytosol | 83.09 | 83.09 |
| TraesCS3A01G236000.1 | Wheat | cytosol | 82.35 | 82.35 |
| Zm00001d044034_P001 | Maize | cytosol | 81.62 | 81.62 |
| EES01186 | Sorghum | cytosol | 80.88 | 80.88 |
| Solyc03g006180.2.1 | Tomato | cytosol | 46.32 | 80.77 |
| Os01t0652700-00 | Rice | cytosol | 80.15 | 80.15 |
| PGSC0003DMT400026444 | Potato | cytosol | 76.47 | 76.47 |
| GSMUA_Achr2P20030_001 | Banana | cytosol | 75.74 | 75.18 |
| PGSC0003DMT400026442 | Potato | cytosol | 73.53 | 73.53 |
| Os05t0573600-00 | Rice | cytosol | 74.26 | 73.19 |
| EES19980 | Sorghum | cytosol | 73.53 | 72.99 |
| PGSC0003DMT400026441 | Potato | cytosol | 72.79 | 72.79 |
| PGSC0003DMT400026443 | Potato | cytosol | 72.06 | 72.06 |
| Zm00001d039083_P001 | Maize | cytosol | 72.06 | 71.01 |
| PGSC0003DMT400024987 | Potato | cytosol | 40.44 | 39.29 |
| PGSC0003DMT400007217 | Potato | cytosol | 46.32 | 37.72 |
| PGSC0003DMT400031909 | Potato | cytosol | 42.65 | 37.42 |
| PGSC0003DMT400054524 | Potato | cytosol | 38.97 | 36.3 |
| PGSC0003DMT400007216 | Potato | cytosol | 43.38 | 33.71 |
| PGSC0003DMT400015025 | Potato | cytosol | 25.0 | 33.01 |
| PGSC0003DMT400015026 | Potato | cytosol | 36.76 | 32.26 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400026439 | EnsemblPlantsGene:PGSC0003DMG400010201 | EntrezGene:102602677 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF21 | PFAM:PF04398 | PGSC:PGSC0003DMG400010201 | RefSeq:XP_006362444.1 |
| SUPFAM:SSF141562 | UniParc:UPI00029653F4 | UniProt:M1AN58 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400010201]
Coordinates
chr2:+:32230620..32231030
Molecular Weight (calculated)
15228.0 Da
IEP (calculated)
9.842
GRAVY (calculated)
-0.210
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKEGAIVK KGHEEGLKMA VSLLEEFGLP MGLLPLADVI EVGFVKNTGY MWIQQNKKIE HKFKMISKMV SYDTEINGYI DKKRIKKLKG VKAKELMLWP
101: PVNEMTVDDP PTGKIQFKSL AGITKTFPVE AFAAGQ
101: PVNEMTVDDP PTGKIQFKSL AGITKTFPVE AFAAGQ
001: MASEGVVVVG GEREGAEIVY GAEECYKQSL ELLEELGFPK GVMPLKNLVE CGRVRATGYV WMKQDTPYEH FFEATNTRVS YGLEVTAYVD KCCMKKMTGV
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
101: KSKQMFLWVP IVEMSMEEPK SKKIYFKTPM GIGRSFPVTG FMDEEEKRNF YLENPKN
Arabidopsis Description
T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.