Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g070500.1.1 | Tomato | cytosol | 97.26 | 96.6 |
| PGSC0003DMT400024987 | Potato | cytosol | 67.12 | 70.0 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 67.81 | 66.44 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 58.9 | 57.33 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 58.22 | 57.05 |
| Bra022026.1-P | Field mustard | cytosol | 54.79 | 56.74 |
| CDY43960 | Canola | cytosol | 54.79 | 56.74 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 58.22 | 56.67 |
| TraesCSU01G243200.1 | Wheat | cytosol | 58.22 | 56.67 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 58.9 | 56.58 |
| TraesCSU01G231600.1 | Wheat | cytosol | 48.63 | 56.35 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 57.53 | 56.0 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 45.21 | 55.93 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 56.85 | 55.7 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 59.59 | 55.41 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 56.85 | 55.33 |
| GSMUA_Achr10P... | Banana | cytosol | 57.53 | 55.26 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 58.22 | 55.19 |
| CDX90222 | Canola | cytosol | 36.99 | 55.1 |
| Bra010803.1-P | Field mustard | cytosol | 36.99 | 55.1 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 56.16 | 55.03 |
| CDY62357 | Canola | cytosol | 54.11 | 54.86 |
| CDY33463 | Canola | cytosol | 54.11 | 54.86 |
| CDX87732 | Canola | cytosol | 53.42 | 54.55 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 54.11 | 54.48 |
| Bra025029.1-P | Field mustard | cytosol | 53.42 | 54.17 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 58.22 | 53.46 |
| AT5G46230.1 | Thale cress | cytosol | 52.05 | 53.15 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 57.53 | 52.83 |
| Bra017568.1-P | Field mustard | cytosol | 52.05 | 52.78 |
| GSMUA_Achr10P... | Banana | cytosol | 56.16 | 52.56 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 56.85 | 52.2 |
| CDY35153 | Canola | cytosol | 51.37 | 52.08 |
| KRH11189 | Soybean | cytosol | 55.48 | 50.0 |
| CDY35265 | Canola | cytosol | 47.95 | 50.0 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 53.42 | 49.68 |
| EER89876 | Sorghum | cytosol | 52.05 | 49.35 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 52.74 | 49.04 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 52.05 | 48.41 |
| EES00076 | Sorghum | cytosol | 56.16 | 47.95 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 52.05 | 47.2 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 53.42 | 46.71 |
| PGSC0003DMT400007217 | Potato | cytosol | 51.37 | 44.91 |
| PGSC0003DMT400031909 | Potato | cytosol | 47.26 | 44.52 |
| CDY03234 | Canola | plastid | 52.74 | 43.75 |
| PGSC0003DMT400007216 | Potato | cytosol | 51.37 | 42.86 |
| Zm00001d008910_P001 | Maize | cytosol | 35.62 | 41.27 |
| PGSC0003DMT400011191 | Potato | cytosol | 37.67 | 40.44 |
| PGSC0003DMT400090071 | Potato | cytosol | 37.67 | 40.44 |
| PGSC0003DMT400026439 | Potato | cytosol | 36.3 | 38.97 |
| Os06t0538900-01 | Rice | plastid | 50.0 | 38.42 |
| PGSC0003DMT400026444 | Potato | cytosol | 35.62 | 38.24 |
| AT1G30020.1 | Thale cress | cytosol | 39.73 | 36.94 |
| PGSC0003DMT400015026 | Potato | cytosol | 36.3 | 34.19 |
| PGSC0003DMT400015025 | Potato | cytosol | 23.97 | 33.98 |
| HORVU3Hr1G028780.1 | Barley | plastid | 56.85 | 33.6 |
| PGSC0003DMT400026443 | Potato | cytosol | 28.77 | 30.88 |
| PGSC0003DMT400026441 | Potato | cytosol | 28.08 | 30.15 |
| PGSC0003DMT400026442 | Potato | cytosol | 28.08 | 30.15 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400054524 | EnsemblPlantsGene:PGSC0003DMG400021164 | EntrezGene:102584190 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | PFAM:PF04398 | PGSC:PGSC0003DMG400021164 | RefSeq:XP_006352968.1 |
| SEG:seg | SUPFAM:SSF141562 | UniParc:UPI000294ED9F | UniProt:M1BWH7 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400021164]
Coordinates
chr2:+:29679195..29679905
Molecular Weight (calculated)
16744.2 Da
IEP (calculated)
7.415
GRAVY (calculated)
-0.509
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQVIASHRE NAEVYTDPVV CKQKSLELLK EINMPNGLLP LEDIVEVGRN AETGFVWLKQ KKAKEHKYKK IGKLVWYDTE VTAFVENRRM KKLTGVKSKE
101: ILIWVTISDI TISDPECKKI NFATPTGLSR SFPASAFEEE EEEEKK
101: ILIWVTISDI TISDPECKKI NFATPTGLSR SFPASAFEEE EEEEKK
001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE
Arabidopsis Description
At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.