Factsheet for Zm00001d008910_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G231600.1	Wheat	cytosol	55.56	55.56
EES00076	Sorghum	cytosol	75.4	55.56
TraesCS3A01G132500.1	Wheat	cytosol	62.7	53.02
TraesCS3D01G148700.1	Wheat	cytosol	62.7	53.02
Os01t0210600-02	Rice	cytosol, extracellular, plasma membrane, plastid	69.84	52.69
TraesCS3A01G132600.1	Wheat	cytosol	65.08	51.57
TraesCS3D01G148900.1	Wheat	cytosol	64.29	50.94
TraesCS3B01G167000.1	Wheat	cytosol	63.49	50.31
TraesCS3B01G053600.1	Wheat	cytosol	57.14	49.66
TraesCS3B01G579600.1	Wheat	cytosol	58.73	49.33
TraesCS3B01G605800.1	Wheat	cytosol	58.73	48.68
TraesCS3B01G594700.1	Wheat	cytosol	57.94	48.67
TraesCS3B01G606500.1	Wheat	cytosol	58.73	48.05
TraesCSU01G243200.1	Wheat	cytosol	57.14	48.0
TraesCS3B01G586700.1	Wheat	cytosol	57.14	48.0
TraesCS3B01G554700.1	Wheat	cytosol	56.35	47.65
TraesCS3B01G554600.1	Wheat	cytosol	56.35	47.33
TraesCS3B01G586600.1	Wheat	cytosol	42.86	45.76
GSMUA_Achr7P13960_001	Banana	cytosol	53.17	42.68
CDX90222	Canola	cytosol	32.54	41.84
Bra010803.1-P	Field mustard	cytosol	32.54	41.84
GSMUA_Achr10P...	Banana	cytosol	50.0	41.45
GSMUA_Achr10P...	Banana	cytosol	50.0	40.38
CDY43960	Canola	cytosol	44.44	39.72
Bra022026.1-P	Field mustard	cytosol	44.44	39.72
AT5G46230.1	Thale cress	cytosol	43.65	38.46
CDY62357	Canola	cytosol	43.65	38.19
CDX87732	Canola	cytosol	42.86	37.76
CDY33463	Canola	cytosol	42.86	37.5
Solyc08g016580.1.1	Tomato	cytosol, extracellular	41.27	37.14
CDY35153	Canola	cytosol	42.06	36.81
Bra025029.1-P	Field mustard	cytosol	42.06	36.81
Bra017568.1-P	Field mustard	cytosol	42.06	36.81
CDY35265	Canola	cytosol	40.48	36.43
VIT_10s0003g03300.t01	Wine grape	cytosol	42.86	36.24
PGSC0003DMT400024987	Potato	cytosol	39.68	35.71
PGSC0003DMT400054524	Potato	cytosol	41.27	35.62
Zm00001d002016_P001	Maize	cytosol	40.48	35.42
Zm00001d002014_P001	Maize	cytosol	40.48	35.42
Solyc02g070500.1.1	Tomato	cytosol	41.27	35.37
Zm00001d002015_P001	Maize	cytosol	39.68	34.97
Zm00001d002017_P001	Maize	cytosol	39.68	34.97
Zm00001d018682_P001	Maize	cytosol	39.68	34.97
Zm00001d018683_P001	Maize	cytosol	39.68	34.97
Zm00001d037018_P001	Maize	cytosol, extracellular, mitochondrion, plastid	44.44	34.78
HORVU3Hr1G028780.1	Barley	plastid	67.46	34.41
Zm00001d044034_P001	Maize	cytosol	34.92	32.35
KRH11189	Soybean	cytosol	39.68	30.86
CDY03234	Canola	plastid	42.86	30.68
Zm00001d030642_P001	Maize	mitochondrion	28.57	30.25
Zm00001d032443_P001	Maize	extracellular	42.06	28.8
Zm00001d039083_P001	Maize	cytosol	30.95	28.26
AT1G30020.1	Thale cress	cytosol	33.33	26.75
Zm00001d002018_P001	Maize	cytosol	42.06	22.55
Zm00001d041578_P001	Maize	cytosol, mitochondrion	39.68	22.32
Zm00001d052772_P001	Maize	cytosol	29.37	21.76
Zm00001d048649_P001	Maize	cytosol	31.75	21.39

Protein Annotations

EnsemblPlants:Zm00001d008910_P001	EnsemblPlants:Zm00001d008910_T001	EnsemblPlantsGene:Zm00001d008910	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538
InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF7	PFAM:PF04398	ProteinID:AQK91005.1	SEG:seg
SUPFAM:SSF141562	UniParc:UPI000220997D	UniProt:K7VR17	MapMan:35.2	:	:

Description

DUF538 family protein

Coordinates

chr8:-:25046318..25046768

Molecular Weight (calculated)

13602.2 Da

IEP (calculated)

4.934

GRAVY (calculated)

-0.306

Length

126 amino acids

Sequence
(BLAST)

001: MGSQAIEAQR AGTEVRLPLG LLPLADMEEV GRQVSYAAEV TAYIEDRRMQ RITRVKTKEL LIWVTLSDMF IDGDDPSRIT FKTPTGLGRT YPVSAFAKEG
101: ATDTEAKPKD APATTVAANG EAAASK

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.