Factsheet for Zm00001d052772_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08981	Sorghum	cytosol	89.41	90.48
TraesCS4D01G143300.1	Wheat	cytosol	79.41	80.36
TraesCSU01G068000.1	Wheat	cytosol	78.82	79.76
Os11t0683600-00	Rice	cytosol	78.24	79.17
Zm00001d048649_P001	Maize	cytosol	80.0	72.73
TraesCS4A01G171900.1	Wheat	mitochondrion	80.0	62.39
Zm00001d044034_P001	Maize	cytosol	40.59	50.74
VIT_14s0060g00900.t01	Wine grape	cytosol	48.82	50.0
Zm00001d039083_P001	Maize	cytosol	40.0	49.28
GSMUA_Achr3P12720_001	Banana	cytosol	46.47	48.47
KRH33794	Soybean	cytosol	48.82	46.63
Zm00001d002017_P001	Maize	cytosol	38.24	45.45
Zm00001d002015_P001	Maize	cytosol	38.24	45.45
Solyc01g100760.2.1	Tomato	cytosol	42.94	44.51
Zm00001d002014_P001	Maize	cytosol	37.06	43.75
Zm00001d030642_P001	Maize	mitochondrion	30.59	43.7
Solyc01g100770.2.1	Tomato	cytosol	41.76	43.29
Zm00001d002016_P001	Maize	cytosol	36.47	43.06
Solyc01g100750.2.1	Tomato	cytosol	41.18	42.94
PGSC0003DMT400007217	Potato	cytosol	41.76	42.52
Zm00001d018683_P001	Maize	cytosol	34.71	41.26
Zm00001d018682_P001	Maize	cytosol	34.71	41.26
KRH02405	Soybean	cytosol	38.82	40.24
PGSC0003DMT400007216	Potato	cytosol	41.18	40.0
KRH50684	Soybean	cytosol	37.65	39.02
Zm00001d037018_P001	Maize	cytosol, extracellular, mitochondrion, plastid	35.29	37.27
Zm00001d041578_P001	Maize	cytosol, mitochondrion	48.24	36.61
Zm00001d032443_P001	Maize	extracellular	36.47	33.7
AT5G49600.1	Thale cress	cytosol	33.53	33.33
CDY05614	Canola	cytosol	31.18	31.74
Bra020626.1-P	Field mustard	cytosol	31.76	31.58
CDY33893	Canola	cytosol	31.18	31.55
CDX86223	Canola	cytosol	30.59	30.41
Bra010024.1-P	Field mustard	cytosol	30.59	30.41
CDX85421	Canola	cytosol	30.0	30.0
Zm00001d008910_P001	Maize	cytosol	21.76	29.37
Zm00001d002018_P001	Maize	cytosol	36.47	26.38

Protein Annotations

EMBL:BT061147	EnsemblPlants:Zm00001d052772_P001	EnsemblPlants:Zm00001d052772_T001	EnsemblPlantsGene:Zm00001d052772	EntrezGene:100276523	Gene3D:2.30.240.10
InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF29	PFAM:PF04398
ProteinID:AQK58037.1	SUPFAM:SSF141562	UniParc:UPI00019488DE	UniProt:C0HFP1	MapMan:35.2	:

Description

Expressed protein; protein

Coordinates

chr4:-:200356259..200356771

Molecular Weight (calculated)

18916.2 Da

IEP (calculated)

8.471

GRAVY (calculated)

-0.111

Length

170 amino acids

Sequence
(BLAST)

001: MALTTDELKT KAEVYYGDEI CQLCTQLLLR EAGLPNGLLP LKDLIECGYV QETGFVWLKQ SKRVDHIFHS LGRLVSYGTE ITGYAEKGRI RKVKGIKTRE
101: LMLWVPVEEI ALDDDPATGK LVCKSIAGIT KTFPASAFHI PEKENNVKAN CAALKPVVLM ERAPRVVKNS

Best Arabidopsis Sequence Match ( AT1G56580.1 )
(BLAST)

001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA

Arabidopsis Description

SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.