Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33893 | Canola | cytosol | 95.21 | 94.64 |
| AT5G49600.1 | Thale cress | cytosol | 86.23 | 84.21 |
| CDX85421 | Canola | cytosol | 83.23 | 81.76 |
| CDX86223 | Canola | cytosol | 83.23 | 81.29 |
| KRH50684 | Soybean | cytosol | 50.9 | 51.83 |
| KRH02405 | Soybean | cytosol | 49.1 | 50.0 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 46.11 | 46.39 |
| Solyc01g100750.2.1 | Tomato | cytosol | 44.91 | 46.01 |
| Solyc01g100760.2.1 | Tomato | cytosol | 43.71 | 44.51 |
| PGSC0003DMT400007217 | Potato | cytosol | 44.31 | 44.31 |
| CDY57268 | Canola | cytosol | 37.72 | 43.75 |
| Solyc01g100770.2.1 | Tomato | cytosol | 42.52 | 43.29 |
| CDX93512 | Canola | cytosol | 36.53 | 43.26 |
| CDY04373 | Canola | cytosol | 37.13 | 43.06 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 41.32 | 42.33 |
| PGSC0003DMT400007216 | Potato | cytosol | 42.52 | 40.57 |
| CDX95276 | Canola | cytosol | 37.13 | 40.0 |
| CDY41704 | Canola | cytosol | 36.53 | 39.35 |
| CDY48399 | Canola | cytosol | 37.13 | 37.35 |
| CDY31099 | Canola | cytosol | 37.13 | 36.69 |
| CDY32168 | Canola | cytosol | 35.93 | 35.71 |
| Zm00001d030642_P001 | Maize | mitochondrion | 25.15 | 35.29 |
| CDX87732 | Canola | cytosol | 29.94 | 34.97 |
| CDY43960 | Canola | cytosol | 29.34 | 34.75 |
| CDX90222 | Canola | cytosol | 20.36 | 34.69 |
| Os11t0683600-00 | Rice | cytosol | 34.73 | 34.52 |
| CDY35153 | Canola | cytosol | 29.34 | 34.03 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 34.13 | 33.93 |
| TraesCSU01G068000.1 | Wheat | cytosol | 33.53 | 33.33 |
| CDY62357 | Canola | cytosol | 28.14 | 32.64 |
| CDY33463 | Canola | cytosol | 28.14 | 32.64 |
| TraesCS5A01G086600.1 | Wheat | cytosol | 34.73 | 32.58 |
| CDY35265 | Canola | cytosol | 26.95 | 32.14 |
| EES08981 | Sorghum | cytosol | 31.74 | 31.55 |
| CDY10988 | Canola | cytosol | 29.34 | 31.21 |
| CDX92616 | Canola | cytosol | 29.34 | 31.21 |
| Zm00001d052772_P001 | Maize | cytosol | 31.74 | 31.18 |
| CDY03486 | Canola | cytosol | 28.74 | 30.57 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 37.13 | 30.54 |
| CDY34258 | Canola | cytosol | 28.14 | 29.94 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 35.93 | 28.04 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 35.93 | 27.27 |
| CDY03234 | Canola | plastid | 28.74 | 27.27 |
| Zm00001d041578_P001 | Maize | cytosol, mitochondrion | 36.53 | 27.23 |
| Zm00001d048649_P001 | Maize | cytosol | 29.94 | 26.74 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 33.53 | 25.69 |
| EES16171 | Sorghum | cytosol | 36.53 | 24.9 |
| HORVU5Hr1G022550.1 | Barley | plastid | 35.33 | 22.18 |
Protein Annotations
| EnsemblPlants:CDY05614 | EnsemblPlantsGene:GSBRNA2T00120578001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF34 | PFAM:PF04398 | ProteinID:CDY05614 | ProteinID:CDY05614.1 | SEG:seg |
| SUPFAM:SSF141562 | UniParc:UPI0004EE75FD | MapMan:35.2 | : | : | : |
Description
BnaC02g39230D
Coordinates
chrLK031963:-:177800..178303
Molecular Weight (calculated)
19410.7 Da
IEP (calculated)
9.960
GRAVY (calculated)
-0.507
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTEAMKAKA EVYHGDKTCR DKFRSLLSQI GLPNRLLSNQ EIEECGYVKD TGFVWLKHKK KEEKKRYQNL FRFDNVMVCF EDEVTAYFEP NKIKKLTGVK
101: AKEFMVWISL GEIHVNRSSG LITFKTHVGL LSKSLPLSVF ENVPADHDIK EKPKKVQQKL NNTKILY
101: AKEFMVWISL GEIHVNRSSG LITFKTHVGL LSKSLPLSVF ENVPADHDIK EKPKKVQQKL NNTKILY
001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
Arabidopsis Description
Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.