Factsheet for TraesCS4A01G171900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G143300.1	Wheat	cytosol	74.77	97.02
TraesCSU01G068000.1	Wheat	cytosol	74.31	96.43
Os11t0683600-00	Rice	cytosol	66.06	85.71
EES08981	Sorghum	cytosol	62.39	80.95
Zm00001d052772_P001	Maize	cytosol	62.39	80.0
Zm00001d048649_P001	Maize	cytosol	55.5	64.71
GSMUA_Achr3P12720_001	Banana	cytosol	37.16	49.69
VIT_14s0060g00900.t01	Wine grape	cytosol	36.7	48.19
TraesCS5A01G086600.1	Wheat	cytosol	38.53	47.19
KRH33794	Soybean	cytosol	37.16	45.51
TraesCS5A01G267900.1	Wheat	cytosol	29.36	45.07
Solyc01g100760.2.1	Tomato	cytosol	33.49	44.51
TraesCS3A01G236000.1	Wheat	cytosol	27.52	44.12
TraesCS5A01G517400.1	Wheat	cytosol	28.44	43.06
TraesCS5A01G517300.1	Wheat	cytosol	28.44	43.06
Solyc01g100750.2.1	Tomato	cytosol	32.11	42.94
Solyc01g100770.2.1	Tomato	cytosol	32.11	42.68
PGSC0003DMT400007217	Potato	cytosol	32.57	42.52
TraesCS5A01G267800.1	Wheat	cytosol	26.61	42.03
TraesCS5A01G517600.1	Wheat	cytosol	27.52	41.38
TraesCS5A01G267700.1	Wheat	cytosol	25.69	40.58
PGSC0003DMT400007216	Potato	cytosol	32.11	40.0
TraesCS5A01G268000.1	Wheat	cytosol	23.39	39.53
KRH50684	Soybean	cytosol	29.36	39.02
KRH02405	Soybean	cytosol	29.36	39.02
TraesCS3A01G132500.1	Wheat	cytosol	25.69	37.58
TraesCS7A01G346000.1	Wheat	cytosol	27.06	37.58
TraesCS5A01G267600.1	Wheat	nucleus	13.76	37.04
TraesCS3A01G132600.1	Wheat	cytosol	25.69	35.22
AT5G49600.1	Thale cress	cytosol	27.52	35.09
TraesCS1A01G181100.1	Wheat	mitochondrion	25.69	34.15
CDY05614	Canola	cytosol	25.69	33.53
CDY33893	Canola	cytosol	25.69	33.33
Bra020626.1-P	Field mustard	cytosol	26.15	33.33
CDX86223	Canola	cytosol	24.77	31.58
Bra010024.1-P	Field mustard	cytosol	24.77	31.58
CDX85421	Canola	cytosol	24.31	31.18

Protein Annotations

EnsemblPlants:TraesCS4A01G171900.1	EnsemblPlantsGene:TraesCS4A01G171900	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF29	PFAM:PF04398	SUPFAM:SSF141562	MapMan:35.2	:

Description

No Description!

Coordinates

chr4A:+:436398123..436398779

Molecular Weight (calculated)

24683.2 Da

IEP (calculated)

9.700

GRAVY (calculated)

-0.380

Length

218 amino acids

Sequence
(BLAST)

001: MIVARRKNSC KIRHNCTRHV LHKGGHFHYE AQNHTHLSLK KIHHSPSSQT MALVDDELKA KAEVYYDDEI CKQCTRLLLK EAGLPNGLLP LKDIVECGYV
101: EETGYVWLKQ KKRIDHVFQS LGRVVSYGTE ITAFAEKGRI RKVKGIKTRE LMVWLPVEEI SLDEPATGKL ICKSIAGFSK IFPASAFHIP EKENEKANCA
201: GPKPVVLMER AARVVKNN

Best Arabidopsis Sequence Match ( AT1G09310.1 )
(BLAST)

001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.