CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50684	Soybean	cytosol	90.85	90.85
Solyc01g100750.2.1	Tomato	cytosol	50.0	50.31
PGSC0003DMT400007217	Potato	cytosol	50.61	49.7
Solyc01g100770.2.1	Tomato	cytosol	49.39	49.39
CDY05614	Canola	cytosol	50.0	49.1
Solyc01g100760.2.1	Tomato	cytosol	48.78	48.78
CDY33893	Canola	cytosol	49.39	48.21
Bra020626.1-P	Field mustard	cytosol	49.39	47.37
AT5G49600.1	Thale cress	cytosol	49.39	47.37
Bra010024.1-P	Field mustard	cytosol	48.78	46.78
CDX86223	Canola	cytosol	48.78	46.78
CDX85421	Canola	cytosol	47.56	45.88
PGSC0003DMT400007216	Potato	cytosol	48.17	45.14
KRH33794	Soybean	cytosol	48.78	44.94
KRH68428	Soybean	cytosol	42.07	41.82
KRH22290	Soybean	cytosol	32.32	38.97
Zm00001d052772_P001	Maize	cytosol	40.24	38.82
EES08981	Sorghum	cytosol	39.63	38.69
KRH27038	Soybean	cytosol	31.71	38.24
TraesCS4D01G143300.1	Wheat	cytosol	39.02	38.1
Zm00001d030642_P001	Maize	mitochondrion	27.44	37.82
Os11t0683600-00	Rice	cytosol	38.41	37.5
TraesCSU01G068000.1	Wheat	cytosol	38.41	37.5
TraesCS5A01G086600.1	Wheat	cytosol	40.24	37.08
KRH11189	Soybean	cytosol	36.59	37.04
KRH02460	Soybean	cytosol	32.32	33.76
KRH50651	Soybean	cytosol	32.32	33.76
Os12t0563600-03	Rice	cytosol, plasma membrane	41.46	33.5
TraesCS5B01G092500.1	Wheat	cytosol	40.85	31.31
Zm00001d048649_P001	Maize	cytosol	35.37	31.02
Zm00001d041578_P001	Maize	cytosol, mitochondrion	42.07	30.8
KRH12720	Soybean	cytosol	29.88	30.62
TraesCS5D01G100100.1	Wheat	cytosol	40.85	30.45
TraesCS4A01G171900.1	Wheat	mitochondrion	39.02	29.36
EES16171	Sorghum	cytosol	42.68	28.57
HORVU5Hr1G022550.1	Barley	plastid	40.85	25.19

Protein Annotations

EMBL:ACUP02010305	EnsemblPlants:KRH02405	EnsemblPlantsGene:GLYMA_17G036800	EntrezGene:100816575	Gene3D:2.30.240.10	InterPro:At5g01610-like
InterPro:DUF538	InterPro:IPR036758	PANTHER:PTHR31676	PANTHER:PTHR31676:SF34	PFAM:PF04398	ProteinID:KRH02405
ProteinID:KRH02405.1	SEG:seg	SUPFAM:SSF141562	UniParc:UPI000233F241	UniProt:K7MJT4	MapMan:35.2

Description

hypothetical protein

Coordinates

chr17:+:2691257..2692110

Molecular Weight (calculated)

19019.3 Da

IEP (calculated)

5.123

GRAVY (calculated)

-0.132

Length

164 amino acids

Sequence
(BLAST)

001: MHKLGQPMSL LTDELKSKAE VYYGDKVCRE KFSLLLAEIG LPDGLLTIQD IEECGYVKEI GFVWLKLEKK REQWFDKILV CYDTVVTAYV EPNKIKNLTG
101: VKARDFLLWF TLNEIFVKDN PEAPVITFKS LVGLSMSFPL SLFEAGKEAN KEEAKEEKWW RMIM

Best Arabidopsis Sequence Match ( AT5G49600.1 )
(BLAST)

001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y

Arabidopsis Description

Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.