Factsheet for TraesCS4D01G143300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G068000.1	Wheat	cytosol	99.4	99.4
Os11t0683600-00	Rice	cytosol	88.1	88.1
EES08981	Sorghum	cytosol	82.14	82.14
Zm00001d052772_P001	Maize	cytosol	80.36	79.41
TraesCS4A01G171900.1	Wheat	mitochondrion	97.02	74.77
Zm00001d048649_P001	Maize	cytosol	73.21	65.78
GSMUA_Achr3P12720_001	Banana	cytosol	48.81	50.31
VIT_14s0060g00900.t01	Wine grape	cytosol	48.81	49.4
KRH33794	Soybean	cytosol	49.4	46.63
Solyc01g100760.2.1	Tomato	cytosol	44.64	45.73
TraesCS3D01G236400.1	Wheat	cytosol	36.31	44.85
TraesCS5D01G275600.1	Wheat	cytosol	36.31	44.2
Solyc01g100750.2.1	Tomato	cytosol	42.86	44.17
Solyc01g100770.2.1	Tomato	cytosol	42.86	43.9
PGSC0003DMT400007217	Potato	cytosol	43.45	43.71
TraesCS5D01G275700.1	Wheat	cytosol	35.71	42.55
TraesCS5D01G275500.1	Wheat	cytosol	33.93	41.3
TraesCS5D01G275400.1	Wheat	cytosol	33.93	41.3
PGSC0003DMT400007216	Potato	cytosol	42.86	41.14
TraesCS4D01G343700.1	Wheat	cytosol	35.12	40.97
TraesCS5D01G100100.1	Wheat	cytosol	52.98	40.45
KRH02405	Soybean	cytosol	38.1	39.02
KRH50684	Soybean	cytosol	38.1	39.02
TraesCS3D01G148700.1	Wheat	cytosol	32.74	36.91
TraesCS7D01G333200.1	Wheat	cytosol	33.93	36.31
AT5G49600.1	Thale cress	cytosol	36.31	35.67
TraesCS3D01G148900.1	Wheat	cytosol	33.33	35.22
TraesCS1D01G184600.1	Wheat	plastid	34.52	34.52
CDY05614	Canola	cytosol	33.93	34.13
CDY33893	Canola	cytosol	33.93	33.93
Bra020626.1-P	Field mustard	cytosol	34.52	33.92
CDX86223	Canola	cytosol	32.74	32.16
Bra010024.1-P	Field mustard	cytosol	32.74	32.16
CDX85421	Canola	cytosol	32.14	31.76

Protein Annotations

EnsemblPlants:TraesCS4D01G143300.1	EnsemblPlantsGene:TraesCS4D01G143300	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF29	PFAM:PF04398	SUPFAM:SSF141562	MapMan:35.2	:

Description

No Description!

Coordinates

chr4D:-:130553826..130554332

Molecular Weight (calculated)

18739.0 Da

IEP (calculated)

8.193

GRAVY (calculated)

-0.151

Length

168 amino acids

Sequence
(BLAST)

001: MALVADELKA KAEVYYDDEI CQQCTRLLLK EAGLPNGLLP LKDIMECGYV EETGYVWLKQ KKRIDHVFQS LGRVVSYGTE ITAFAEKGRI KKVKGIKTRE
101: LMVWLPVEEI SLDEPATGKL ICKSIAGFSK IFPASAFHIP EKENEKANCA GPKPVVLMER AAPVVKNN

Best Arabidopsis Sequence Match ( AT5G49600.1 )
(BLAST)

001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y

Arabidopsis Description

Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.