Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33893 | Canola | cytosol | 84.8 | 86.31 |
| CDY05614 | Canola | cytosol | 84.21 | 86.23 |
| Bra020626.1-P | Field mustard | cytosol | 83.04 | 83.04 |
| CDX86223 | Canola | cytosol | 81.29 | 81.29 |
| Bra010024.1-P | Field mustard | cytosol | 81.29 | 81.29 |
| CDX85421 | Canola | cytosol | 80.12 | 80.59 |
| KRH50684 | Soybean | cytosol | 49.12 | 51.22 |
| KRH02405 | Soybean | cytosol | 47.37 | 49.39 |
| Solyc01g100750.2.1 | Tomato | cytosol | 43.27 | 45.4 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 43.86 | 45.18 |
| Solyc01g100760.2.1 | Tomato | cytosol | 42.69 | 44.51 |
| PGSC0003DMT400007217 | Potato | cytosol | 43.27 | 44.31 |
| Solyc01g100770.2.1 | Tomato | cytosol | 41.52 | 43.29 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 40.94 | 42.94 |
| PGSC0003DMT400007216 | Potato | cytosol | 42.11 | 41.14 |
| AT1G56580.1 | Thale cress | cytosol | 36.26 | 37.35 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 35.67 | 36.31 |
| Os11t0683600-00 | Rice | cytosol | 35.67 | 36.31 |
| Zm00001d030642_P001 | Maize | mitochondrion | 25.15 | 36.13 |
| TraesCSU01G068000.1 | Wheat | cytosol | 35.09 | 35.71 |
| AT1G09310.1 | Thale cress | cytosol | 36.84 | 35.2 |
| AT5G46230.1 | Thale cress | cytosol | 29.24 | 34.97 |
| TraesCS5A01G086600.1 | Wheat | cytosol | 36.26 | 34.83 |
| EES08981 | Sorghum | cytosol | 33.33 | 33.93 |
| Zm00001d052772_P001 | Maize | cytosol | 33.33 | 33.53 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 38.01 | 32.02 |
| AT4G24130.1 | Thale cress | cytosol | 27.49 | 29.94 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 37.43 | 29.91 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 37.43 | 29.09 |
| Zm00001d048649_P001 | Maize | cytosol | 30.99 | 28.34 |
| Zm00001d041578_P001 | Maize | cytosol, mitochondrion | 36.84 | 28.12 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 35.09 | 27.52 |
| AT1G30020.1 | Thale cress | cytosol | 25.15 | 27.39 |
| EES16171 | Sorghum | cytosol | 37.43 | 26.12 |
| HORVU5Hr1G022550.1 | Barley | plastid | 36.84 | 23.68 |
Protein Annotations
| Gene3D:2.30.240.10 | MapMan:35.2 | EntrezGene:835022 | ProteinID:AAV63933.1 | ProteinID:AED95834.1 | ArrayExpress:AT5G49600 |
| EnsemblPlantsGene:AT5G49600 | RefSeq:AT5G49600 | TAIR:AT5G49600 | RefSeq:AT5G49600-TAIR-G | EnsemblPlants:AT5G49600.1 | TAIR:AT5G49600.1 |
| EMBL:AY735717 | InterPro:At5g01610-like | ProteinID:BAB10774.1 | InterPro:DUF538 | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0008150 | InterPro:IPR036758 | RefSeq:NP_199771.1 | PFAM:PF04398 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF34 |
| UniProt:Q9FGY5 | SUPFAM:SSF141562 | UniParc:UPI000009D7AD | SEG:seg | : | : |
Description
Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
Coordinates
chr5:+:20130752..20131295
Molecular Weight (calculated)
19877.2 Da
IEP (calculated)
9.489
GRAVY (calculated)
-0.570
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.