Factsheet for TraesCS5D01G100100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G086600.1	Wheat	cytosol	79.09	97.75
TraesCS5B01G092500.1	Wheat	cytosol	94.09	96.73
HORVU5Hr1G022550.1	Barley	plastid	95.0	78.57
Os12t0563600-03	Rice	cytosol, plasma membrane	64.55	69.95
Zm00001d030642_P001	Maize	mitochondrion	36.36	67.23
Zm00001d041578_P001	Maize	cytosol, mitochondrion	65.0	63.84
EES16171	Sorghum	cytosol	68.64	61.63
TraesCS4D01G143300.1	Wheat	cytosol	40.45	52.98
GSMUA_Achr3P12720_001	Banana	cytosol	39.09	52.76
Solyc01g100760.2.1	Tomato	cytosol	38.64	51.83
Solyc01g100770.2.1	Tomato	cytosol	38.18	51.22
Solyc01g100750.2.1	Tomato	cytosol	37.73	50.92
PGSC0003DMT400007217	Potato	cytosol	38.64	50.9
PGSC0003DMT400007216	Potato	cytosol	39.55	49.71
VIT_14s0060g00900.t01	Wine grape	cytosol	36.82	48.8
KRH33794	Soybean	cytosol	38.64	47.75
TraesCS3D01G148700.1	Wheat	cytosol	31.82	46.98
TraesCS3D01G148900.1	Wheat	cytosol	33.18	45.91
TraesCS3D01G236400.1	Wheat	cytosol	26.36	42.65
TraesCS4D01G343700.1	Wheat	cytosol	27.27	41.67
KRH02405	Soybean	cytosol	30.45	40.85
KRH50684	Soybean	cytosol	30.45	40.85
TraesCS5D01G275600.1	Wheat	cytosol	25.45	40.58
TraesCS5D01G275700.1	Wheat	cytosol	25.91	40.43
TraesCS5D01G275500.1	Wheat	cytosol	25.0	39.86
TraesCS7D01G333200.1	Wheat	cytosol	28.18	39.49
TraesCS5D01G275400.1	Wheat	cytosol	24.55	39.13
AT5G49600.1	Thale cress	cytosol	29.09	37.43
CDY05614	Canola	cytosol	27.27	35.93
CDY33893	Canola	cytosol	27.27	35.71
CDX86223	Canola	cytosol	27.73	35.67
Bra010024.1-P	Field mustard	cytosol	27.73	35.67
CDX85421	Canola	cytosol	27.27	35.29
Bra020626.1-P	Field mustard	cytosol	27.27	35.09
TraesCS1D01G184600.1	Wheat	plastid	25.91	33.93

Protein Annotations

EnsemblPlants:TraesCS5D01G100100.1	EnsemblPlantsGene:TraesCS5D01G100100	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF10	PFAM:PF04398	SEG:seg	SUPFAM:SSF141562	MapMan:35.2

Description

No Description!

Coordinates

chr5D:+:112356630..112357292

Molecular Weight (calculated)

23970.8 Da

IEP (calculated)

6.167

GRAVY (calculated)

-0.478

Length

220 amino acids

Sequence
(BLAST)

001: MPMLIPDDVR AKAEIYTGDA AGQEKTRLML AETELPSGLL PLKDIIECGY VEETGFVWLK QKKRVDHYFA KAGRHVSYAT EVSAIAEKGR LKKISGVKAK
101: EMLIWVNLHE ICVDDPPTGK LHCKAIGGLS RSFPVEAFEA TDALAVPVTG RLKKKTEKES TDKKDEKEED SAEKPKEEAA EKPKGAAVAP APAAVDEIGQ
201: KMKEMNTEAP VQAEAVAAKN

Best Arabidopsis Sequence Match ( AT5G49600.1 )
(BLAST)

001: MVTEAMKAKA EVYHGDKTCR EKFGSLLSEI GLPNRLLSNK EIKECGYVKD TGFVWLKHKE KKKEDQKRRY QDLLRFDNVV VCFEDEVTAY FEPNRIKKLT
101: GVKAKEFMVW ISLGEIQVNR SSGLITFKTE VGLLSKSLPL SVFEDVHGDD HDLKEKPKKE LKLNKTKIYL Y

Arabidopsis Description

Similarity to unknown protein [Source:UniProtKB/TrEMBL;Acc:Q9FGY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.