Factsheet for HORVU5Hr1G022550.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G086600.1	Wheat	cytosol	64.66	96.63
TraesCS5D01G100100.1	Wheat	cytosol	78.57	95.0
TraesCS5B01G092500.1	Wheat	cytosol	75.94	94.39
Os12t0563600-03	Rice	cytosol, plasma membrane	52.63	68.97
Zm00001d030642_P001	Maize	mitochondrion	29.32	65.55
Zm00001d041578_P001	Maize	cytosol, mitochondrion	53.01	62.95
EES16171	Sorghum	cytosol	56.39	61.22
GSMUA_Achr3P12720_001	Banana	cytosol	32.33	52.76
Solyc01g100760.2.1	Tomato	cytosol	31.95	51.83
Solyc01g100770.2.1	Tomato	cytosol	31.58	51.22
Solyc01g100750.2.1	Tomato	cytosol	31.2	50.92
PGSC0003DMT400007217	Potato	cytosol	31.95	50.9
PGSC0003DMT400007216	Potato	cytosol	32.71	49.71
VIT_14s0060g00900.t01	Wine grape	cytosol	30.45	48.8
KRH33794	Soybean	cytosol	31.95	47.75
HORVU3Hr1G058820.1	Barley	cytosol	22.18	43.38
HORVU4Hr1G085120.1	Barley	cytosol	22.56	41.38
HORVU5Hr1G073650.1	Barley	cytosol	21.43	41.3
KRH02405	Soybean	cytosol	25.19	40.85
KRH50684	Soybean	cytosol	25.19	40.85
HORVU5Hr1G073690.1	Barley	cytosol	21.05	40.58
HORVU3Hr1G030970.1	Barley	cytosol	20.68	39.86
HORVU5Hr1G073700.1	Barley	cytosol, mitochondrion, nucleus	22.56	37.5
AT5G49600.1	Thale cress	cytosol	23.68	36.84
HORVU5Hr1G073640.1	Barley	cytosol, mitochondrion, nucleus	22.56	36.81
CDY05614	Canola	cytosol	22.18	35.33
CDY33893	Canola	cytosol	22.18	35.12
CDX86223	Canola	cytosol	22.56	35.09
Bra010024.1-P	Field mustard	cytosol	22.56	35.09
CDX85421	Canola	cytosol	22.18	34.71
Bra020626.1-P	Field mustard	cytosol	22.18	34.5
HORVU1Hr1G047930.1	Barley	plastid	20.68	33.54
HORVU3Hr1G028780.1	Barley	plastid	27.44	29.55
HORVU5Hr1G073710.1	Barley	mitochondrion	21.43	28.64

Protein Annotations

EnsemblPlants:HORVU5Hr1G022550.1	EnsemblPlantsGene:HORVU5Hr1G022550	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF10	PFAM:PF04398	SEG:seg	SUPFAM:SSF141562	UniParc:UPI000B481A1E
UniProt:A0A287QML0	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:114447509..114449220

Molecular Weight (calculated)

29030.8 Da

IEP (calculated)

7.104

GRAVY (calculated)

-0.483

Length

266 amino acids

Sequence
(BLAST)

001: FFSTHPKFET TQVSSQLKQA SKARACVSER ASELRETTLH RPATMPMLIP DDVRAKAEIY TGDAAGQEKT RLMLAETELP SGLLPLKDII ECGYVEETGF
101: VWLKQKKRVD HYFAKAGRHV SYATEVCAIA EKGRLKKISG VKAKEMLIWV NLHEICVDDP PTGKLHCKAL GGLSRSFPVE AFEAADALPV PVTGRLKKKT
201: EKESTDQKDE KEEGAAEKLK EEAAEKPKGS AVAPAPGPAA VDEIGQKMKE MNTEATVQAE AVAANN

Best Arabidopsis Sequence Match ( AT1G56580.1 )
(BLAST)

001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA

Arabidopsis Description

SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.