Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g100760.2.1 | Tomato | cytosol | 93.9 | 93.9 |
| PGSC0003DMT400007216 | Potato | cytosol | 94.51 | 88.57 |
| Solyc01g100750.2.1 | Tomato | cytosol | 87.2 | 87.73 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 64.63 | 63.86 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 55.49 | 55.83 |
| Solyc02g070500.1.1 | Tomato | cytosol | 45.12 | 50.34 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 42.68 | 50.0 |
| KRH02405 | Soybean | cytosol | 49.39 | 49.39 |
| KRH50684 | Soybean | cytosol | 49.39 | 49.39 |
| TraesCS5A01G086600.1 | Wheat | cytosol | 50.0 | 46.07 |
| Zm00001d030642_P001 | Maize | mitochondrion | 32.93 | 45.38 |
| Os11t0683600-00 | Rice | cytosol | 44.51 | 43.45 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 43.9 | 42.86 |
| CDY05614 | Canola | cytosol | 43.29 | 42.52 |
| EES08981 | Sorghum | cytosol | 43.29 | 42.26 |
| TraesCSU01G068000.1 | Wheat | cytosol | 43.29 | 42.26 |
| Solyc08g083090.1.1 | Tomato | cytosol | 39.63 | 42.21 |
| Zm00001d052772_P001 | Maize | cytosol | 43.29 | 41.76 |
| CDY33893 | Canola | cytosol | 42.68 | 41.67 |
| Bra020626.1-P | Field mustard | cytosol | 43.29 | 41.52 |
| AT5G49600.1 | Thale cress | cytosol | 43.29 | 41.52 |
| CDX86223 | Canola | cytosol | 42.68 | 40.94 |
| Bra010024.1-P | Field mustard | cytosol | 42.68 | 40.94 |
| CDX85421 | Canola | cytosol | 42.07 | 40.59 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 49.39 | 39.9 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 51.22 | 39.25 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 51.22 | 38.18 |
| Solyc02g076890.1.1 | Tomato | cytosol | 30.49 | 36.76 |
| Zm00001d041578_P001 | Maize | cytosol, mitochondrion | 49.39 | 36.16 |
| Solyc03g006180.2.1 | Tomato | cytosol | 17.07 | 35.9 |
| Zm00001d048649_P001 | Maize | cytosol | 39.63 | 34.76 |
| EES16171 | Sorghum | cytosol | 51.22 | 34.29 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 42.68 | 32.11 |
| HORVU5Hr1G022550.1 | Barley | plastid | 51.22 | 31.58 |
Protein Annotations
| EnsemblPlants:Solyc01g100770.2.1 | EnsemblPlantsGene:Solyc01g100770.2 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF10 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 | UniParc:UPI00027678AB |
| UniProt:K4B1A8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:90717139..90717906
Molecular Weight (calculated)
18582.5 Da
IEP (calculated)
5.401
GRAVY (calculated)
-0.330
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLITEEIRA SATEFYTGND ICQEKSKFLL TEMNLPNGLL PMQDMLECGY VKDTGFVWLK SKKKTEHKFE KIDRSVQYAT EVTAYVEPNK IKKLTGVKAK
101: ELLMWLTLNE ICVDEPSTGK IHFKSPTGLA RTFPVSAFEL DVPKKEVKEE ANEVSVATVE VKEV
101: ELLMWLTLNE ICVDEPSTGK IHFKSPTGLA RTFPVSAFEL DVPKKEVKEE ANEVSVATVE VKEV
001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
Arabidopsis Description
SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.