Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G143300.1 | Wheat | cytosol | 88.1 | 88.1 |
| TraesCSU01G068000.1 | Wheat | cytosol | 87.5 | 87.5 |
| EES08981 | Sorghum | cytosol | 80.95 | 80.95 |
| Zm00001d052772_P001 | Maize | cytosol | 79.17 | 78.24 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 85.71 | 66.06 |
| Zm00001d048649_P001 | Maize | cytosol | 72.62 | 65.24 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 50.6 | 51.2 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 49.4 | 50.92 |
| KRH33794 | Soybean | cytosol | 51.79 | 48.88 |
| Os07t0120000-00 | Rice | cytosol | 40.48 | 47.89 |
| Os07t0118250-00 | Rice | cytosol | 40.48 | 47.89 |
| Solyc01g100760.2.1 | Tomato | cytosol | 44.05 | 45.12 |
| Os07t0118200-00 | Rice | cytosol | 38.1 | 45.07 |
| Os07t0119800-00 | Rice | cytosol | 38.1 | 44.76 |
| Solyc01g100770.2.1 | Tomato | cytosol | 43.45 | 44.51 |
| Os07t0120300-00 | Rice | cytosol | 37.5 | 44.37 |
| PGSC0003DMT400007217 | Potato | cytosol | 44.05 | 44.31 |
| Os05t0573600-00 | Rice | cytosol | 36.31 | 44.2 |
| Solyc01g100750.2.1 | Tomato | cytosol | 42.86 | 44.17 |
| Os01t0652700-00 | Rice | cytosol | 35.71 | 44.12 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 52.98 | 43.84 |
| Os07t0120100-01 | Rice | cytosol | 36.9 | 43.66 |
| Os07t0120650-01 | Rice | cytosol | 36.9 | 43.66 |
| Os07t0120500-00 | Rice | cytosol | 36.9 | 43.66 |
| Os11t0594700-00 | Rice | nucleus | 35.71 | 42.25 |
| Os11t0594800-01 | Rice | cytosol | 35.12 | 41.55 |
| PGSC0003DMT400007216 | Potato | cytosol | 42.86 | 41.14 |
| KRH02405 | Soybean | cytosol | 37.5 | 38.41 |
| KRH50684 | Soybean | cytosol | 36.9 | 37.8 |
| AT5G49600.1 | Thale cress | cytosol | 36.31 | 35.67 |
| CDY05614 | Canola | cytosol | 34.52 | 34.73 |
| CDY33893 | Canola | cytosol | 34.52 | 34.52 |
| Bra020626.1-P | Field mustard | cytosol | 35.12 | 34.5 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 33.33 | 33.53 |
| Os06t0538900-01 | Rice | plastid | 37.5 | 33.16 |
| CDX86223 | Canola | cytosol | 32.74 | 32.16 |
| Bra010024.1-P | Field mustard | cytosol | 32.74 | 32.16 |
| CDX85421 | Canola | cytosol | 32.14 | 31.76 |
| Os11t0595000-00 | Rice | nucleus | 31.55 | 26.37 |
Protein Annotations
| EnsemblPlants:Os11t0683600-00 | EnsemblPlantsGene:Os11g0683600 | EntrezGene:4351128 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 |
| InterPro:IPR036758 | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF29 | PFAM:PF04398 | ProteinID:BAT15258.1 | ProteinID:EAZ19257.1 |
| RefSeq:XP_015617874.1 | SUPFAM:SSF141562 | UniParc:UPI0000681C4E | UniProt:A3CDU4 | MapMan:35.2 | : |
Description
Similar to predicted protein. (Os11t0683600-00)
Coordinates
chr11:+:27649056..27649811
Molecular Weight (calculated)
18949.5 Da
IEP (calculated)
8.469
GRAVY (calculated)
-0.104
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVIADEIK AKAEVYYDDE ICQQCTRLLL KEAGLPNGLL PLKDIMECGY VEETGFVWLK QKKRIDHVFQ SLGRLVSYGT EITAFAEKGR IKKVKGIKTR
101: ELMVWVPVEE IALDEQKTGK LICKSIAGIT KTFPASAFQI PEKEEKITCA IPKPVVLMER AHQVIKNN
101: ELMVWVPVEE IALDEQKTGK LICKSIAGIT KTFPASAFQI PEKEEKITCA IPKPVVLMER AHQVIKNN
001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
Arabidopsis Description
SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.