Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g100770.2.1 | Tomato | cytosol | 88.57 | 94.51 |
| Solyc01g100760.2.1 | Tomato | cytosol | 88.0 | 93.9 |
| PGSC0003DMT400007217 | Potato | cytosol | 87.43 | 91.62 |
| VIT_14s0060g00900.t01 | Wine grape | cytosol | 60.57 | 63.86 |
| GSMUA_Achr3P12720_001 | Banana | cytosol | 53.14 | 57.06 |
| PGSC0003DMT400054524 | Potato | cytosol | 42.86 | 51.37 |
| PGSC0003DMT400024987 | Potato | cytosol | 40.0 | 50.0 |
| KRH02405 | Soybean | cytosol | 45.14 | 48.17 |
| KRH50684 | Soybean | cytosol | 45.14 | 48.17 |
| Zm00001d030642_P001 | Maize | mitochondrion | 31.43 | 46.22 |
| TraesCS5A01G086600.1 | Wheat | cytosol | 46.86 | 46.07 |
| PGSC0003DMT400090071 | Potato | cytosol | 34.29 | 44.12 |
| PGSC0003DMT400011191 | Potato | cytosol | 34.29 | 44.12 |
| PGSC0003DMT400026439 | Potato | cytosol | 33.71 | 43.38 |
| PGSC0003DMT400031909 | Potato | cytosol | 38.29 | 43.23 |
| Os11t0683600-00 | Rice | cytosol | 41.14 | 42.86 |
| TraesCS4D01G143300.1 | Wheat | cytosol | 41.14 | 42.86 |
| CDY05614 | Canola | cytosol | 40.57 | 42.52 |
| TraesCSU01G068000.1 | Wheat | cytosol | 40.57 | 42.26 |
| AT5G49600.1 | Thale cress | cytosol | 41.14 | 42.11 |
| CDY33893 | Canola | cytosol | 40.0 | 41.67 |
| Bra020626.1-P | Field mustard | cytosol | 40.57 | 41.52 |
| Os12t0563600-03 | Rice | cytosol, plasma membrane | 48.0 | 41.38 |
| Zm00001d052772_P001 | Maize | cytosol | 40.0 | 41.18 |
| Bra010024.1-P | Field mustard | cytosol | 40.0 | 40.94 |
| CDX86223 | Canola | cytosol | 40.0 | 40.94 |
| CDX85421 | Canola | cytosol | 39.43 | 40.59 |
| EES08981 | Sorghum | cytosol | 38.86 | 40.48 |
| PGSC0003DMT400026444 | Potato | cytosol | 31.43 | 40.44 |
| TraesCS5B01G092500.1 | Wheat | cytosol | 48.57 | 39.72 |
| TraesCS5D01G100100.1 | Wheat | cytosol | 49.71 | 39.55 |
| Zm00001d041578_P001 | Maize | cytosol, mitochondrion | 49.71 | 38.84 |
| PGSC0003DMT400015025 | Potato | cytosol | 22.29 | 37.86 |
| PGSC0003DMT400015026 | Potato | cytosol | 32.0 | 36.13 |
| EES16171 | Sorghum | cytosol | 49.71 | 35.51 |
| PGSC0003DMT400026441 | Potato | cytosol | 27.43 | 35.29 |
| PGSC0003DMT400026442 | Potato | cytosol | 27.43 | 35.29 |
| PGSC0003DMT400026443 | Potato | cytosol | 27.43 | 35.29 |
| Zm00001d048649_P001 | Maize | cytosol | 37.14 | 34.76 |
| HORVU5Hr1G022550.1 | Barley | plastid | 49.71 | 32.71 |
| TraesCS4A01G171900.1 | Wheat | mitochondrion | 40.0 | 32.11 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400007216 | EnsemblPlantsGene:PGSC0003DMG400002790 | EntrezGene:102587682 | EntrezGene:102588001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like |
| InterPro:DUF538 | InterPro:IPR036758 | ncoils:Coil | PANTHER:PTHR31676 | PANTHER:PTHR31676:SF10 | PFAM:PF04398 |
| PGSC:PGSC0003DMG400002790 | RefSeq:XP_006344787.1 | RefSeq:XP_006344788.1 | SEG:seg | SUPFAM:SSF141562 | UniParc:UPI00029497F8 |
| UniProt:M0ZSN7 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002790]
Coordinates
chr1:+:78411996..78412743
Molecular Weight (calculated)
19711.8 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.363
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLITEEIRA SATEFYTGND ICQEKSKFLL TEMNLPNGVL PMQDMLECGY VKDTGFVWLK SKNKTEHKFE KIGRSVQYAT EVTAYVEPNK IKKLTGVKAK
101: ELLMWLTLTE ICVDEPSTGK IHFKTPTGLS RTFPVSAFEL DEPKKEVKEE VKEEVKEEAK EVSAAAVAAV EVKEV
101: ELLMWLTLTE ICVDEPSTGK IHFKTPTGLS RTFPVSAFEL DEPKKEVKEE VKEEVKEEAK EVSAAAVAAV EVKEV
001: MGLVTDEVRA RAEKYTGDEI CREKTKEFLK EVSMPNGLLP LKDIEEVGYD RETGIVWLKQ KKSITHKFEA IGKLVSYATE VIAQVEVGKI KKLTGVKAKE
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
101: LLIWVTLNEL VLEQPTSSGK INFRTPTGLS RTFPVSAFVV PEVEKPATEK NNGTTEVKEA VAVTDA
Arabidopsis Description
SVBAt1g56580/F25P12_18 [Source:UniProtKB/TrEMBL;Acc:Q9FXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.