Factsheet for HORVU3Hr1G028780.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G148900.1	Wheat	cytosol	61.13	94.97
TraesCS3A01G132600.1	Wheat	cytosol	60.73	94.34
TraesCS3B01G167000.1	Wheat	cytosol	60.73	94.34
TraesCS3A01G132500.1	Wheat	cytosol	56.68	93.96
TraesCS3D01G148700.1	Wheat	cytosol	56.68	93.96
Os01t0210600-02	Rice	cytosol, extracellular, plasma membrane, plastid	51.42	76.05
EES00076	Sorghum	cytosol	51.42	74.27
Zm00001d008910_P001	Maize	cytosol	34.41	67.46
GSMUA_Achr10P...	Banana	cytosol	40.08	63.46
GSMUA_Achr10P...	Banana	cytosol	38.46	62.5
GSMUA_Achr7P13960_001	Banana	cytosol	39.27	61.78
CDX90222	Canola	cytosol	23.08	58.16
Bra010803.1-P	Field mustard	cytosol	23.08	58.16
PGSC0003DMT400054524	Potato	cytosol	33.6	56.85
Solyc02g070500.1.1	Tomato	cytosol	33.6	56.46
Solyc08g016580.1.1	Tomato	cytosol, extracellular	31.98	56.43
VIT_10s0003g03300.t01	Wine grape	cytosol	34.01	56.38
PGSC0003DMT400024987	Potato	cytosol	31.58	55.71
CDY35265	Canola	cytosol	30.36	53.57
Bra022026.1-P	Field mustard	cytosol	30.36	53.19
CDY43960	Canola	cytosol	30.36	53.19
CDY62357	Canola	cytosol	30.36	52.08
CDY33463	Canola	cytosol	29.96	51.39
AT5G46230.1	Thale cress	cytosol	29.55	51.05
Bra025029.1-P	Field mustard	cytosol	29.55	50.69
CDX87732	Canola	cytosol	29.15	50.35
CDY35153	Canola	cytosol	29.15	50.0
Bra017568.1-P	Field mustard	cytosol	28.74	49.31
HORVU3Hr1G030970.1	Barley	cytosol	26.72	47.83
HORVU4Hr1G085120.1	Barley	cytosol	27.53	46.9
HORVU5Hr1G073650.1	Barley	cytosol	25.51	45.65
KRH11189	Soybean	cytosol	29.55	45.06
HORVU5Hr1G073690.1	Barley	cytosol	25.1	44.93
CDY03234	Canola	plastid	31.17	43.75
HORVU5Hr1G073700.1	Barley	cytosol, mitochondrion, nucleus	27.94	43.12
HORVU5Hr1G073640.1	Barley	cytosol, mitochondrion, nucleus	27.94	42.33
HORVU3Hr1G058820.1	Barley	cytosol	23.08	41.91
AT1G30020.1	Thale cress	cytosol	25.91	40.76
HORVU1Hr1G047930.1	Barley	plastid	24.7	37.2
HORVU5Hr1G073710.1	Barley	mitochondrion	27.94	34.67
HORVU5Hr1G022550.1	Barley	plastid	29.55	27.44

Protein Annotations

EnsemblPlants:HORVU3Hr1G028780.1	EnsemblPlantsGene:HORVU3Hr1G028780	Gene3D:2.30.240.10	InterPro:At5g01610-like	InterPro:DUF538	InterPro:IPR036758
PANTHER:PTHR31676	PANTHER:PTHR31676:SF7	PFAM:PF04398	SEG:seg	SUPFAM:SSF141562	UniParc:UPI000B4827F3
UniProt:A0A287KK32	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:130788800..130790309

Molecular Weight (calculated)

27142.6 Da

IEP (calculated)

9.949

GRAVY (calculated)

-0.497

Length

247 amino acids

Sequence
(BLAST)

001: PPQALITLAL NPLSQPSHPQ LGRRYPSRNG KHQTYFPPIK SAPPHPPIQQ QQTKYPNTKK GPSNSGASTP PSRVESEFTS RDLIQPVEMA QAIEAQREGA
101: EVYHGAALCA EKAVELLAET NMPLGLLPLA DMEEVGYNRA TGFVWLRQKK ALTHTFKQIG RQVSYATEVT AFVEDRKMKR MTGVKSKELL IWITLCDMFI
201: DKDDPSKITF KTPTGLGRTF PVSAFEKKDD AKATAAAAGG KEAVVAK

Best Arabidopsis Sequence Match ( AT5G46230.1 )
(BLAST)

001: MSSQETKSDQ REGAEICNGE SNCKQKAKEI LSTMNLPKGL LPLDNMTEIG HNKSTGYVWI KIKNKVQHRF KAIGRNVSYD SEVTAILENR RMSQLTGIKS
101: KEILIWVTIS EIFVNHQDPT QITFANPTGL SRTFPVTAFE EDE

Arabidopsis Description

At5g46230 [Source:UniProtKB/TrEMBL;Acc:Q9FL37]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.