Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33463 | Canola | cytosol | 99.31 | 99.31 |
| Bra025029.1-P | Field mustard | cytosol | 98.61 | 98.61 |
| CDX87732 | Canola | cytosol | 81.25 | 81.82 |
| CDY43960 | Canola | cytosol | 78.47 | 80.14 |
| CDY35153 | Canola | cytosol | 77.08 | 77.08 |
| AT5G46230.1 | Thale cress | cytosol | 72.92 | 73.43 |
| CDY03234 | Canola | plastid | 77.78 | 63.64 |
| Solyc08g016580.1.1 | Tomato | cytosol, extracellular | 56.94 | 58.57 |
| PGSC0003DMT400024987 | Potato | cytosol | 54.86 | 56.43 |
| Solyc02g070500.1.1 | Tomato | cytosol | 56.25 | 55.1 |
| CDX90222 | Canola | cytosol | 37.5 | 55.1 |
| VIT_10s0003g03300.t01 | Wine grape | cytosol | 56.94 | 55.03 |
| PGSC0003DMT400054524 | Potato | cytosol | 54.86 | 54.11 |
| TraesCSU01G231600.1 | Wheat | cytosol | 45.83 | 52.38 |
| TraesCS3B01G594700.1 | Wheat | cytosol | 54.17 | 52.0 |
| TraesCS3B01G586700.1 | Wheat | cytosol | 54.17 | 52.0 |
| TraesCS3B01G554700.1 | Wheat | cytosol | 52.78 | 51.01 |
| CDY35265 | Canola | cytosol | 49.31 | 50.71 |
| TraesCS3B01G579600.1 | Wheat | cytosol | 52.78 | 50.67 |
| TraesCS3B01G605800.1 | Wheat | cytosol | 53.47 | 50.66 |
| TraesCS3B01G606500.1 | Wheat | cytosol | 54.17 | 50.65 |
| TraesCS3A01G132500.1 | Wheat | cytosol | 52.08 | 50.34 |
| TraesCSU01G243200.1 | Wheat | cytosol | 52.08 | 50.0 |
| GSMUA_Achr10P... | Banana | cytosol | 53.47 | 49.36 |
| TraesCS3B01G554600.1 | Wheat | cytosol | 51.39 | 49.33 |
| TraesCS3D01G148700.1 | Wheat | cytosol | 50.69 | 48.99 |
| TraesCS3B01G586600.1 | Wheat | cytosol | 39.58 | 48.31 |
| TraesCS3B01G053600.1 | Wheat | cytosol | 48.61 | 48.28 |
| TraesCS3A01G132600.1 | Wheat | cytosol | 52.78 | 47.8 |
| GSMUA_Achr7P13960_001 | Banana | cytosol | 52.08 | 47.77 |
| GSMUA_Achr10P... | Banana | cytosol | 50.0 | 47.37 |
| KRH11189 | Soybean | cytosol | 52.78 | 46.91 |
| TraesCS3D01G148900.1 | Wheat | cytosol | 51.39 | 46.54 |
| EER89876 | Sorghum | cytosol | 49.31 | 46.1 |
| TraesCS3B01G167000.1 | Wheat | cytosol | 50.69 | 45.91 |
| TraesCS7A01G346000.1 | Wheat | cytosol | 49.31 | 45.22 |
| CDY57268 | Canola | cytosol | 45.14 | 45.14 |
| Zm00001d037018_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 50.0 | 44.72 |
| TraesCS7D01G333200.1 | Wheat | cytosol | 48.61 | 44.59 |
| TraesCS7B01G237200.1 | Wheat | cytosol | 48.61 | 44.59 |
| EES00076 | Sorghum | cytosol | 52.08 | 43.86 |
| Zm00001d008910_P001 | Maize | cytosol | 38.19 | 43.65 |
| Os01t0210600-02 | Rice | cytosol, extracellular, plasma membrane, plastid | 50.0 | 43.11 |
| CDY04373 | Canola | cytosol | 43.06 | 43.06 |
| CDX93512 | Canola | cytosol | 40.97 | 41.84 |
| CDX92616 | Canola | cytosol | 43.06 | 39.49 |
| CDX95276 | Canola | cytosol | 42.36 | 39.35 |
| CDY41704 | Canola | cytosol | 42.36 | 39.35 |
| CDY10988 | Canola | cytosol | 42.36 | 38.85 |
| CDY34258 | Canola | cytosol | 41.67 | 38.22 |
| CDY03486 | Canola | cytosol | 40.97 | 37.58 |
| CDY48399 | Canola | cytosol | 42.36 | 36.75 |
| CDY31099 | Canola | cytosol | 40.97 | 34.91 |
| Os06t0538900-01 | Rice | plastid | 45.83 | 34.74 |
| CDY32168 | Canola | cytosol | 40.28 | 34.52 |
| HORVU3Hr1G028780.1 | Barley | plastid | 52.08 | 30.36 |
| CDY05614 | Canola | cytosol | 32.64 | 28.14 |
| CDY33893 | Canola | cytosol | 31.94 | 27.38 |
| CDX85421 | Canola | cytosol | 31.94 | 27.06 |
| CDX86223 | Canola | cytosol | 31.94 | 26.9 |
Protein Annotations
| EnsemblPlants:CDY62357 | EnsemblPlantsGene:GSBRNA2T00036196001 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF7 | PFAM:PF04398 | ProteinID:CDY62357 | ProteinID:CDY62357.1 | SUPFAM:SSF141562 |
| UniParc:UPI0004EB815B | UniProt:A0A078JD89 | MapMan:35.2 | : | : | : |
Description
BnaCnng40070DBnaCnng40070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD89]
Coordinates
chrLK034132:-:8572..9055
Molecular Weight (calculated)
16225.4 Da
IEP (calculated)
5.955
GRAVY (calculated)
-0.454
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQETITNQ REGAEIVNGA SMCKQKANEM LSSMNLPKGL LPLDNMTEIG YNKSTGYIWI KMNNNVQHQF KAIGKNVSYD AEVTAFVENR RMRGLTGIKS
101: KELFIWVTIT EIYIDDQDTS KITFAGRSGL SRSFPVSAFE EEEK
101: KELFIWVTIT EIYIDDQDTS KITFAGRSGL SRSFPVSAFE EEEK
001: MALREMIIDE SDDIESYSDQ SLCLDKAKEL LALIKLPTGL LPLKDMTEVG YNKTKGFVWM RMRSKIEHTF REIGRRVLYD TEITAFVEDR RMRRLTGVKS
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
101: KELMIWVPVN DIFIKRKILR RSPLLIPPAC HEHLKFQHFN VRVDKLKEKR SNQTSLM
Arabidopsis Description
Uncharacterized protein T1P2.11 [Source:UniProtKB/TrEMBL;Acc:Q9C8R7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.